Clone FMO12667 Report

Search the DGRC for FMO12667

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG3513-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12667.5prime Sequence

290 bp (290 high quality bases) assembled on 2013-01-17

> FMO12667.5prime
CAGTCGACATGAAGTATATCGGCTTTGTCGCCATCGCCTTTTTGCTGAGT
CTGTCCGGCAGTCGTTTATGGGTGCATGCCAAGCCGGAGATGTGCCAGCA
GCCCTCTTCGATGGTGGGCATGGCGCAGGATGGAGCTGCCTGCATGGCTT
TTATGCCGGCCTGGACCTATGATGCCTCCAAAAACGCCTGCACCGAGTTC
ATTTTCGGTGGCTGCGGTGGAAACTCCAATCAGTTCTCTACCAAGAGTGA
ATGCGAAAAGGCCTGCAAGGACGCAAGCTTTCTAGACCAT

FMO12667.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3513-RA 423 CG3513-RA 15..278 9..272 1320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3692844..3693029 272..87 930 100 Minus
2L 23513712 2L 3693090..3693168 87..9 395 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:22:56 has no hits.

FMO12667.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:29 Download gff for FMO12667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3513-RA 6..283 1..277 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:23 Download gff for FMO12667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3513-RA 6..283 1..277 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:14 Download gff for FMO12667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3513-RA 6..283 1..277 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:14 Download gff for FMO12667.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3692845..3693028 88..271 100 <- Minus
2L 3693090..3693175 1..87 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:23 Download gff for FMO12667.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3692845..3693028 88..271 100 <- Minus
arm_2L 3693090..3693175 1..87 95   Minus