FMO12669.5prime Sequence
783 bp (776 high quality bases) assembled on 2013-01-17
> FMO12669.5prime
CAGTCGACATGTTCAAGACCATCGCTGTAGTAGTGCTCCTGGCAGCCCTG
GCCAGTGCCGAGCTCCATCGCGTGCCGATCCTCAAGGAGCAGAACTTTGT
GAAGACGCGTCAGAATGTTTTGGCCGAGAAATCCTATCTGCGCACCAAGT
ACCAGCTGCCCTCGCTTCGCAGCGTGGATGAGGAACAGCTGTCCAACTCG
ATGAATATGGCTTACTACGGAGCCATCTCCATCGGAACTCCCGCTCAGAG
CTTCAAGGTTCTGTTCGACTCAGGCTCCTCGAACCTGTGGGTGCCATCGA
ACACCTGCAAGAGCGATGCCTGCCTGACCCACAACCAGTACGACTCCAGC
GCCAGCTCCACCTACGTGGCCAACGGCGAATCCTTCTCCATCCAGTATGG
CACTGGCAGCCTAACTGGCTACCTGTCCACCGATACCGTCGACGTCAATG
GCCTGAGCATCCAGAGCCAGACCTTTGCTGAATCCACCAACGAGCCGGGC
ACCAACTTCAACGATGCCAACTTCGATGGCATTCTCGGTATGGCCTATGA
GTCCCTGGCCGTGGATGGTGTGGCTCCTCCGTTCTACAACATGGTGTCCC
AGGGTCTGGTCGACAACTCCGTCTTCTCGTTCTATCTGGGCCCGCGATGG
CACCTCCACTATGGGTGGTGAACTCATCTTCGGGTGCTCCGATGCCTCTC
TGTACTCTGGCGCTCTGACCTACGTTCCCATCTCGGAGCAGGGCTACTGG
CAGTCACCATGGCTGGATCCTCCATTGACGGTT
FMO12669.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bace-RB | 1415 | CG13095-RB | 40..814 | 9..783 | 3800 | 99.5 | Plus |
| Bace-RA | 1200 | CG13095-RA | 40..814 | 9..783 | 3800 | 99.5 | Plus |
| CG33128-RA | 1387 | CG33128-RA | 476..621 | 330..475 | 205 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8495494..8496268 | 783..9 | 3750 | 99.5 | Minus |
| 2L | 23513712 | 2L | 1494545..1494690 | 330..475 | 205 | 76 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:23:12 has no hits.
FMO12669.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:30 Download gff for
FMO12669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bace-RA | 30..811 | 1..783 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:34 Download gff for
FMO12669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bace-RA | 33..814 | 1..783 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:23 Download gff for
FMO12669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bace-RA | 33..814 | 1..783 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:23 Download gff for
FMO12669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8495494..8496273 | 1..783 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:34 Download gff for
FMO12669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8495494..8496273 | 1..783 | 98 | | Minus |
