FMO12670.5prime Sequence
257 bp (257 high quality bases) assembled on 2013-01-17
> FMO12670.5prime
CAGTCGACATGGCCAACACTCCAGCCACCTCCTCTGCCGGACCCGTGCTC
CGTGGCCTCCACAATGCCACCATCAAGCGCAACCTGGCCGTTTCCCTGGG
CCTGACCGCCGTGGTGACCATCGCCTACAAAATTCTGGTCAACGATCCCA
AGAAGGCCGCCTACGCCGACTTCTACTCGAAGTACGATGCCAACAAGTCC
TTCGAGCGCATGAAGGCCGCCGGTCGTTTCCAGTCCTGCGCAAGCTTTCT
AGACCAT
FMO12670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cype-RC | 460 | CG14028-RC | 60..295 | 4..239 | 1180 | 100 | Plus |
cype-RA | 396 | CG14028-RA | 60..295 | 4..239 | 1180 | 100 | Plus |
cype-RB | 398 | CG14028-RB | 63..297 | 5..239 | 1175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5327503..5327677 | 5..179 | 875 | 100 | Plus |
2L | 23513712 | 2L | 5327744..5327804 | 179..239 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:30:37 has no hits.
FMO12670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:17 Download gff for
FMO12670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cype-RA | 42..287 | 1..246 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:06 Download gff for
FMO12670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cype-RA | 56..301 | 1..246 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:18 Download gff for
FMO12670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cype-RA | 56..301 | 1..246 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:18 Download gff for
FMO12670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5327500..5327676 | 1..178 | 99 | -> | Plus |
2L | 5327744..5327810 | 179..246 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:06 Download gff for
FMO12670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5327500..5327676 | 1..178 | 99 | -> | Plus |
arm_2L | 5327744..5327810 | 179..246 | 95 | | Plus |