FMO12672.5prime Sequence
617 bp (617 high quality bases) assembled on 2013-01-17
> FMO12672.5prime
CAGTCGACATGTCCTGTCGCTGCTTTTGCTTAGTGGCTGCAGCACTGCTG
CTGCTGTTCTTCCACCAGCAATCCTGTGACGCAGCCACCCAGACGCCCCA
AAAGACGGTGGTAATTGCGGAGCAGAGTGCGCCGGCTGCTGAGGTGGAGG
CCAAAAAGCCAGTCGTGAAGAAATCGCAAGCAGAGAATCCTCCGGCAGGA
CCAAAGGATTCTATGGTGGTCGTAGACGATGGCGGACCTGCTCCGGTTGC
TCCAGGTGCTTCGGTTGCCACACAAGTTTCACCAGGAGATGCCAAGGCAC
CGGAAATGGTGCAGCCTCCGGGAGGTCTTCCCGTGGATGATGTTCATGTT
GAACGCTCTCCCATGTCCCCCGATGTGGACTTTCCGGGCCAGGCTGTTGT
CTACATCCTCGTGGGAATCACCAGTACTGCAATACTGCTGCTTATTATGA
GGGTTTATAGGCTCCGACTTTCCCGGGCGGAGCGCAAGTACGGCGTGCAG
GGCGACCGCGCCAACCAGGAGCTGACACCACTGCCCATGGCCATCGAGGA
CGTGAATAGTGACGAAGAGGACCACACCCTGTTCGAGTTGGTTCAGGTTG
CAAGCTTTCTAGACCAT
FMO12672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12159-RB | 861 | CG12159-RB | 127..717 | 9..599 | 2940 | 99.8 | Plus |
| CG12159-RA | 889 | CG12159-RA | 127..705 | 9..587 | 2880 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7915900..7916352 | 461..9 | 2250 | 99.8 | Minus |
| 2R | 25286936 | 2R | 7915395..7915523 | 587..459 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:30:51 has no hits.
FMO12672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:18 Download gff for
FMO12672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12159-RB | 112..705 | 9..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:14 Download gff for
FMO12672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12159-RB | 127..720 | 9..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:26 Download gff for
FMO12672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12159-RB | 127..720 | 9..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:26 Download gff for
FMO12672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7915395..7915521 | 461..587 | 100 | <- | Minus |
| 2R | 7915901..7916352 | 9..460 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:14 Download gff for
FMO12672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3802900..3803026 | 461..587 | 100 | <- | Minus |
| arm_2R | 3803406..3803857 | 9..460 | 99 | | Minus |
