Clone FMO12673 Report

Search the DGRC for FMO12673

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14694-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12673.5prime Sequence

832 bp (782 high quality bases) assembled on 2013-01-17

> FMO12673.5prime
CAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTATGCATATTC
GGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCGGAAATCCT
GATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCGATCCGTTT
ACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCGTCTTCCTC
ATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAATGCCACTAC
AGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTTGAGCGGCC
TGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCGAGGTGGCC
TACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTATCCCAGGGT
GACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGTTGCGGGAA
TCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACAAGCAACTG
TTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGGGCATTCTT
TTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAGCGAGGCCA
TAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGGGTTCAGAG
CAACCCAGTAACGAGGAAGCGAGCCAAGAAAAAGAAGATACAGCGTTGCA
GCTCCTTTTGGTCCCACTTTCCGTAGTGCCTACACTAATCCCTTGTGATA
CAATGGAGCTTGTGTATGCATCAGTTTGGCTGGATTTTCTGCAATTCACC
ACCTATATGCAGGTGGTATGGAAGTCCTTTCA

FMO12673.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 11..831 9..829 3910 98.9 Plus
CG6574-RA 1962 CG6574-RA 709..810 342..443 255 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10859229..10859533 519..215 1525 100 Minus
3R 32079331 3R 10858856..10859165 829..520 1155 97.1 Minus
3R 32079331 3R 10859595..10859803 217..9 1045 100 Minus
3R 32079331 3R 10861801..10861902 443..342 255 83.3 Minus
Blast to na_te.dros performed on 2014-11-28 18:23:22 has no hits.

FMO12673.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:32 Download gff for FMO12673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..832 5..831 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:38 Download gff for FMO12673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..832 5..831 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:28 Download gff for FMO12673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..832 5..831 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:28 Download gff for FMO12673.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10859595..10859807 5..217 99   Minus
3R 10858855..10859165 520..831 96 <- Minus
3R 10859229..10859530 218..519 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:38 Download gff for FMO12673.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6685317..6685529 5..217 99   Minus
arm_3R 6684577..6684887 520..831 96 <- Minus
arm_3R 6684951..6685252 218..519 100 <- Minus