FMO12673.5prime Sequence
832 bp (782 high quality bases) assembled on 2013-01-17
> FMO12673.5prime
CAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTATGCATATTC
GGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCGGAAATCCT
GATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCGATCCGTTT
ACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCGTCTTCCTC
ATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAATGCCACTAC
AGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTTGAGCGGCC
TGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCGAGGTGGCC
TACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTATCCCAGGGT
GACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGTTGCGGGAA
TCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACAAGCAACTG
TTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGGGCATTCTT
TTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAGCGAGGCCA
TAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGGGTTCAGAG
CAACCCAGTAACGAGGAAGCGAGCCAAGAAAAAGAAGATACAGCGTTGCA
GCTCCTTTTGGTCCCACTTTCCGTAGTGCCTACACTAATCCCTTGTGATA
CAATGGAGCTTGTGTATGCATCAGTTTGGCTGGATTTTCTGCAATTCACC
ACCTATATGCAGGTGGTATGGAAGTCCTTTCA
FMO12673.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-RA | 1369 | CG14694-RA | 11..831 | 9..829 | 3910 | 98.9 | Plus |
CG6574-RA | 1962 | CG6574-RA | 709..810 | 342..443 | 255 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10859229..10859533 | 519..215 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 10858856..10859165 | 829..520 | 1155 | 97.1 | Minus |
3R | 32079331 | 3R | 10859595..10859803 | 217..9 | 1045 | 100 | Minus |
3R | 32079331 | 3R | 10861801..10861902 | 443..342 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:23:22 has no hits.
FMO12673.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:32 Download gff for
FMO12673.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 7..832 | 5..831 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:38 Download gff for
FMO12673.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 7..832 | 5..831 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:28 Download gff for
FMO12673.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 7..832 | 5..831 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:28 Download gff for
FMO12673.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10859595..10859807 | 5..217 | 99 | | Minus |
3R | 10858855..10859165 | 520..831 | 96 | <- | Minus |
3R | 10859229..10859530 | 218..519 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:38 Download gff for
FMO12673.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6685317..6685529 | 5..217 | 99 | | Minus |
arm_3R | 6684577..6684887 | 520..831 | 96 | <- | Minus |
arm_3R | 6684951..6685252 | 218..519 | 100 | <- | Minus |