FMO12674.5prime Sequence
230 bp (230 high quality bases) assembled on 2013-01-17
> FMO12674.5prime
CAGTCGACATGGCCGGCGGGGGCAGGACAGCCGGCAAATACGGATATTCG
GACAACAATTATTACAGTGGTCACTCGTACAAGAGCATCAACGATGAGAT
TATACTGGTCAGCATCATAATGGGCATCACCATACTGGTCCTCATCACCA
TCGCACTGTGCTACATTGCGTACGAGAAGTGCCAGAAGAAGCGGGAGTAC
TATATCAACGCCGCAAGCTTTCTAGACCAT
FMO12674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17193-RC | 3568 | CG17193-RC | 193..396 | 9..212 | 1020 | 100 | Plus |
CG17193-RB | 3915 | CG17193-RB | 540..743 | 9..212 | 1020 | 100 | Plus |
CG17193-RA | 3918 | CG17193-RA | 543..746 | 9..212 | 1020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20039593..20039736 | 212..69 | 720 | 100 | Minus |
3R | 32079331 | 3R | 20049647..20049709 | 71..9 | 315 | 100 | Minus |
X | 23542271 | X | 17422885..17422989 | 189..85 | 240 | 81.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:23:28 has no hits.
FMO12674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:33 Download gff for
FMO12674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17193-RA | 539..750 | 9..220 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:42 Download gff for
FMO12674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17193-RA | 539..750 | 9..220 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:32 Download gff for
FMO12674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17193-RA | 543..754 | 9..220 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:32 Download gff for
FMO12674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20039585..20039737 | 64..220 | 94 | -> | Minus |
3R | 20049654..20049709 | 9..63 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:42 Download gff for
FMO12674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15865307..15865459 | 64..220 | 94 | -> | Minus |
arm_3R | 15875376..15875431 | 9..63 | 98 | | Minus |