FMO12676.5prime Sequence
326 bp (326 high quality bases) assembled on 2013-01-17
> FMO12676.5prime
CAGTCGACATGCCCGCTCCAGCCAGTTCAACGTCCGTGGGCAGCGGATCG
CGCTCCCCCAGCAAATTGTCGGCGCCACGTAGCGCCGGATCCGGAGGCGG
CAGCACCCTGAAGCAGCGCAAGACCACCACCAGCACCACAGCGGCCCGGA
GCCGTGCACCCGGCGGAGCCGGAACTGGTGGCATGTGGCGTTTCTACACG
GACGACTCGCCCGGTATCAAAGTTGGTCCCGTACCCGTGCTGGTCATGTC
GCTGCTGTTCATCGCTTCCGTCTTCATGCTGCACATTTGGGGCAAATACA
ATCGTTCTGCAAGCTTTCTAGACCAT
FMO12676.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sec61beta-RA | 792 | CG10130-RA | 130..429 | 9..308 | 1485 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14618958..14619170 | 11..223 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 14619234..14619318 | 224..308 | 410 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:23:41 has no hits.
FMO12676.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:34 Download gff for
FMO12676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sec61beta-RA | 174..478 | 9..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:50 Download gff for
FMO12676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sec61beta-RA | 130..434 | 9..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:42 Download gff for
FMO12676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sec61beta-RA | 130..434 | 9..314 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:42 Download gff for
FMO12676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14618949..14619170 | 1..223 | 98 | -> | Plus |
2R | 14619234..14619323 | 224..314 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:50 Download gff for
FMO12676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10506454..10506675 | 1..223 | 98 | -> | Plus |
arm_2R | 10506739..10506828 | 224..314 | 96 | | Plus |