FMO12677.5prime Sequence
944 bp (848 high quality bases) assembled on 2013-01-17
> FMO12677.5prime
CAGTCGACATGAAGCCAACCTGCATATTGTGTCTCCTGGTGGTGATCCTC
CTGCATCCGCGCATCTCAAAATCCTCAACGAGCGGCAACCCCAGTGCCAG
TTCCAGTTCCAGTTCTCCGCCAGAAATCCCCGCCTTCCGGCAATGCGAAA
CCATTCGCATTGAGATGTGCCGCAAGATCGGCTACAATGAGACCTCCATG
CCAAATCTGGTGGGTAACGAAATGCAAACGGACGTGGAGTACACACTGCA
AACCTTTGCACCACTGATCGAATACGACTGCAGTTCCCAGTTGAAGCTGT
TCCTGTGCGCCGCCTACGTGCCCATGTGCACGCCCAAAGCTCCAGTCCAT
GCCATCGGTCCGTGCCGGAGTCTCTGTGAGTCCGTGCGAATACGTTGTCA
TCCAGTTTTGCAGGGATTCGGATTTCCATGGCCACCGGCTCTCGACTGCG
ATAAATTTCCGCGAGAGAACAACCACGAGACGATGTGTATGGAAGGTCCC
GGTGAATTGCATCAGCCGCAGCAGGAGCAGGATTTGTATGGGCTACCGGG
CCAAGGAATACCCGGTGGATTGGGCGGTAAACTGCCCATGGATTGCTCGG
GACTGGCCAAATCGCATCTGTACGTAAGGCTACCCAGATCTGGACGCTGT
GCACCACTCTGCGAGGCGGACATACTGTTCACACCGGCGGAGAAGCATCT
GGCAGAGATCTGGGTCTCCACATGGGCCTATGCCGCTTTGGGTTTGGCCC
TGTAGCCACCGTGTGTCTTTTGGCCAGCGATGGCAGTCGTTTGGCCAGCG
CCAAGTGGTCCAGATTGTTGTCCGCCGCCTGATTTGTTGCACAACATGGT
TCACCTTGGGCCTGGGCAGTGTCCTTTTAGGGTGGGGAAGAAAACGGGAA
TTGCGTGTCGCACGGATCCTCAAGCGGCCCAAATGAATTCTATA
FMO12677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz4-RA | 3927 | CG4626-RA | 701..1622 | 9..938 | 4235 | 97.7 | Plus |
| fz4-RB | 3674 | CG4626-RB | 448..1369 | 9..938 | 4235 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7108807..7109621 | 822..9 | 4025 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:23:47 has no hits.
FMO12677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:35 Download gff for
FMO12677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz4-RB | 411..1304 | 1..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:54 Download gff for
FMO12677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz4-RB | 440..1333 | 1..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:45 Download gff for
FMO12677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz4-RB | 440..1333 | 1..900 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:45 Download gff for
FMO12677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7108708..7109629 | 1..928 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:54 Download gff for
FMO12677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7002741..7003662 | 1..928 | 97 | | Minus |
