FMO12685.5prime Sequence
1007 bp (888 high quality bases) assembled on 2013-01-17
> FMO12685.5prime
CAGTCGACATGGTTCAGAATAAACAGAAAACAGCGAAGCCACCAAAGCTG
CTAAAAGGCGCAGCCAAGGAGCCTGCACTTTCGAAGGCGGAAAACTGGCA
GAAGGTTAAAATCAAGGGCCACGTGATATCCGACGATGGTGGCGGCTTCG
AGGGATTAATTGGCCTGGAGGTCCTCAAGGACTACGATGCATCGCTGGTG
AAGTCCTCGCAGAAGAGGACCACATCCCGGAATCCAGACAGAGAGCGCAA
GCTGAAGAAGAAAAAGAGGAAGGTATCGAAGGGCGACGAGGAGGAATCCA
GCGAGAGTTCCAGCGAATCCGAAAGCGAGGATGAAGTGGCGGTCGCTGCT
AGGACCAGTAAAAAAGCCCGCCTGGCCGAGCGTCATGCGCAAAAAATGCA
GAAACTGCGCGAGAAGCGTGAAAAGCGAAAGGAGCTGCGGAAACAGAAGA
AATCGAAGGGCAAGGAAAACGACAACAGTGAGGAGTCCAGTGATGAGCAC
GCGGCAGATCGTTTCGCATTGCTCAGGCCACCACCATCGGACGATGAAGA
AGAAGTGGTCAAGGCGGAAGATTCGGCAGACCAACAGGAGTCGACCGACG
AAGAAGCACCCGAATTAGTGCCCATCTCCACAGGCGAAGCCGAAGATATG
TCCGCCTGGAACGGCCTGGTGTTCCCGCTTCCATTTTGCGTGCCCTCGGC
GAGCAAGGCTTCAAGACGCCCACACAAATCCAGGCACTGACGCTGCCGGC
TGCAATCCACGGCAAAAAGGACATCCTTGGAGCAGCCGAAACGGGCAGCG
GAAAAACCCTGGCCTTTGGCATACCCATGCTCGCCGGATCATGGAGCTGA
AGCAAAGGAATATTCGCTCTGGCATACGCCAAGCCGCCCATGTTGAAGGG
ACAGCAGCCGGAGCCAGCGCAGATGAGCACGAGCCTGACCGCCCCCGCCG
AAGACTGACTATGTTTCCGGTGCAATGAATGAAGAAGCGATGCGGAAGAA
CCAGGGC
FMO12685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9143-RA | 2708 | CG9143-RA | 94..1085 | 9..996 | 4560 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20277895..20278822 | 934..9 | 4400 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:24:23 has no hits.
FMO12685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:39 Download gff for
FMO12685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9143-RA | 175..1166 | 9..996 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:19 Download gff for
FMO12685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9143-RA | 94..1085 | 9..996 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:07 Download gff for
FMO12685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9143-RA | 94..1085 | 9..996 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:07 Download gff for
FMO12685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20277831..20278822 | 9..996 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:19 Download gff for
FMO12685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16165336..16166327 | 9..996 | 97 | | Minus |
