FMO12689.5prime Sequence
389 bp (389 high quality bases) assembled on 2013-01-17
> FMO12689.5prime
CAGTCGACATGCTTTTCGATGGCGAAACCGGCAATGGGCAAGGTCAGGGC
CAGAATACCCTGAATCCATTGGGGCCAGGCCAGGAGGAGCCCGCCCTATG
CGAGCAGTACTATCTGCTGGGCGATGGTTCCATCATTCTGCGCAACCATT
CCATCGACTTGTCGAATCCGCCCCTGAAATCGCGCTGCTGCCAGCTCCCA
ACACTCATCCACGACATATGCGTCAACTGCGTGATGGATCTCTGCGAGGA
GTGTGGCTACTCCTGCGGCGAGTGCGCCAAGTTTATTTGCCGCAACTGCG
TGACTTTATTTGGTAATCGAATTGAAGAAGAGGAGGATCCGCTGTGCGAG
CACTGCCAGATGTTCCTCAGCGCAAGCTTTCTAGACCAT
FMO12689.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3176-RD | 627 | CG3176-RD | 75..437 | 9..371 | 1815 | 100 | Plus |
| CG3176-RA | 517 | CG3176-RA | 75..437 | 9..371 | 1815 | 100 | Plus |
| CG32817-RB | 580 | CG32817-RB | 142..504 | 9..371 | 1770 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 482132..482433 | 9..310 | 1510 | 100 | Plus |
| X | 23542271 | X | 479644..479945 | 9..310 | 1480 | 99.3 | Plus |
| X | 23542271 | X | 477621..477931 | 9..310 | 1025 | 89.4 | Plus |
| X | 23542271 | X | 482518..482578 | 311..371 | 305 | 100 | Plus |
| X | 23542271 | X | 480030..480090 | 311..371 | 290 | 98.4 | Plus |
| X | 23542271 | X | 478013..478073 | 311..371 | 245 | 93.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:24:42 has no hits.
FMO12689.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:41 Download gff for
FMO12689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3176-RA | 143..513 | 1..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:31 Download gff for
FMO12689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3176-RA | 67..437 | 1..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:16 Download gff for
FMO12689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3176-RA | 67..437 | 1..371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:16 Download gff for
FMO12689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 482124..482433 | 1..310 | 99 | -> | Plus |
| X | 482518..482578 | 311..371 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:31 Download gff for
FMO12689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 376157..376466 | 1..310 | 99 | -> | Plus |
| arm_X | 376551..376611 | 311..371 | 100 | | Plus |
