FMO12690.5prime Sequence
266 bp (266 high quality bases) assembled on 2013-01-17
> FMO12690.5prime
CAGTCGACATGGTGCGCTTTGCGGTGCACTTGTTACCCTCCTTCTTGAAT
GGGGCGGGGCAGCTCTTGGCCGAAACAGTCATGGCGATGAGGGCCAAGAT
GAAGATGCCACGAACAGCTGTTTGGTTTTTAGCCCTTAACCCGCTGCTTA
TGCCGGGCGGCTTTTTCCTCCCAGTTGATGCGGTGGCAACCTCAGGCATT
GACTTTGGTAAAATTGTGGCACGCCAAGCACATTTTGAAGCTCATCAGGC
AAGCTTTCTAGACCAT
FMO12690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34291-RA | 267 | CG34291-RA | 69..167 | 107..9 | 495 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26427961..26428102 | 107..248 | 710 | 100 | Plus |
| 3R | 32079331 | 3R | 26425390..26425488 | 9..107 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:24:48 has no hits.
FMO12690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:42 Download gff for
FMO12690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34291-RA | 69..172 | 1..107 | 96 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:35 Download gff for
FMO12690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34291-RA | 69..172 | 1..107 | 96 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:20 Download gff for
FMO12690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34291-RA | 69..172 | 1..107 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:20 Download gff for
FMO12690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26425384..26425488 | 1..107 | 96 | -> | Plus |
| 3R | 26427962..26428105 | 108..252 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:35 Download gff for
FMO12690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22251106..22251210 | 1..107 | 96 | -> | Plus |
| arm_3R | 22253684..22253827 | 108..252 | 98 | | Plus |
