Clone FMO12691 Report

Search the DGRC for FMO12691

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG4752-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12691.5prime Sequence

1031 bp (896 high quality bases) assembled on 2013-01-17

> FMO12691.5prime
CAGTCGACATGTCGGGCACCAAATACTGTTTCGCAATTGATCGCGGTGGC
ACTTTTACGGACGTGTTGTGCATTTGTCCGAATGGCAAAGTGCGAACCAT
GAAGTTGCTCTCTGAGGATCCGGAGCGGTACAGCGATGCGCCCCGGGAGG
GCATCCGGCGAATTCTTAAGGAGGAGACCGGTGAAGATCTGGCCGCGAGC
GGCTTGGTGGATACCTCGAAAATCGGTTGGGTTCGCATGGGCACTACGGT
GGCCACCAATGCTCTCTTGGAACGCAAGGGAGATCCAGTGGTCTTGGTGG
TCAACAGTGGTTTCCGGGATCTGCTCTACATTGGCAACCAGGCCAGGCCG
AAGATCTTCGATCTAAACATTCGCAAGCCAGCGAATCTATACAAGTCCGT
AGTCGAGGTGGATTGCCGCATAGTTCCAAAGCAGGCGGACCGCTGTGAGC
TCAACCACAGCTGGAAAGAGTTGGAGGGTGTGGCCGGCACCAAGTATCTG
GAGGTGCGTCCCGTTGATGAGGTGGCAGTACGACAAGCCCTCTCAGATGC
CCGTGATCAGGGTGTCTCATCCGTTTCCGTGGTTTTGGCCCACAGCTACG
CCTGTCCGGAGCACGAGCTCCGAGTGGGAGCCATTGCCCGGGAGCTCGGC
TTCAGTCATGTGACGCTGTCCCACCAGGCTATGCCCATGTGTCGGGTGGT
GGCCCGTGGCTATACGGCGTGCGCAGAGGCCTACTTGACTCCTCATGTAG
ACCGCTACTTGGCCAGCTTCAAATCCGGTTTCGACAAGCAGTTGGAGGGT
GTGATGTGCTCTTTATGCAATCTGATGGAGGTCTGACCAATATGGAAGAC
TTCCGTTGAGCCTCGGGTAATTCTATCGGGTCCAGCTGGAGGAGTTGTTA
GAATACCGCAACTGTCCGGAGTCCCGGGAAACGGAACCTGCCCACTGATT
CGGTTTTGGACTGGGCCGCACACTCTACGATGTGTACAGGGTATGCCGGG
AACCTACCAACCCTGGATTCGAAAGCCCCAC

FMO12691.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG4752-RA 3995 CG4752-RA 53..1065 9..1031 4490 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22478431..22478875 9..453 2225 100 Plus
2R 25286936 2R 22478932..22479244 454..766 1565 100 Plus
2R 25286936 2R 22479745..22479878 765..898 515 95.6 Plus
Blast to na_te.dros performed on 2014-11-28 18:24:55 has no hits.

FMO12691.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:43 Download gff for FMO12691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4752-RA 41..1014 1..985 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:39 Download gff for FMO12691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4752-RA 49..1022 1..985 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:24 Download gff for FMO12691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4752-RA 49..1022 1..985 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:24 Download gff for FMO12691.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22478427..22478875 1..453 99 -> Plus
2R 22478932..22479244 454..766 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:39 Download gff for FMO12691.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18365932..18366380 1..453 99 -> Plus
arm_2R 18366437..18366749 454..766 100 -> Plus