Clone FMO12694 Report

Search the DGRC for FMO12694

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:94
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG1722-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12694.5prime Sequence

871 bp (871 high quality bases) assembled on 2013-01-17

> FMO12694.5prime
CAGTCGACATGCCCAAGTCCAAGCAGAGATCGCCAATAAAAGCGGCTACA
AAACCGCTTAGCACAAAGAAGCTACAGTCCAAAGTCAAAAGTGTCGGTAA
GACCAAGCCGAAAATGCAGCAGAAATCCGTAAAGCAACCGCTCAAGAAAC
CCATGAGACGATCTCCGCTGATGCGAGCCGCCCTCCAGCCCACCATTTTG
GGCTTGGCCAAGGAAAAGCCGGTGAAAAAGTCGCGGGTGACCTTCAAGAA
GTCACATCGTCGGCCGCTGGACGCCATGCAATCCCTTGGGATGTCCCGCA
GGACCAGACTCATAGACGCCAGTCCCCAGAGAAAGGCCAAGGGTACTTCG
GTACTGTTCCTGGGTAAGGATTCAAGGACCACCAAGATGCCCAAGAAAAT
GAAGCCCTCAAGCGAAAAGCCTGCAAGCGAAAAAAATCAGTTACCCCGGT
TAAAAAGACGGATGGAATTCCGAGTAATGACGAAAGCCGAGACTAGGGCT
ACCGACGGCGTGAACTTCTTCTGCAATCTCGGCGTAAAGATGCAGCCACC
GGTGACTCGGAAATATCAACAGCTGCAACAACGAGGTGAAGCAGGATTTG
AGGGAAGATTGGCAGGTGGAGAAGGTACTAGACCGGGTGACGGCGCCTTG
CGGAGACCAGTGAGAACCCAGCCATCTGGTCTGTCATCCCTAGTCGGTAA
AGTCGCCGGTATCGGTGCGTTCGCCAATGATGTGCTGGTCCCGCTGACCG
GCCGGTTGCCCATCATCGACTTTATCTCTACCAAAGAGTTCCAGAATATG
TCTGCCGCTTCGAAATGGAAGCCGCACTCGCGGAAAAAGTACCCATTTAG
CAAGCTTTCTAGGACCATTCG

FMO12694.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 1173 CG1722-RA 124..963 9..849 4180 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21250186..21251025 849..9 4155 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 18:24:17 has no hits.

FMO12694.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:39 Download gff for FMO12694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 9..849 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:15 Download gff for FMO12694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 9..849 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:03 Download gff for FMO12694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 9..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:03 Download gff for FMO12694.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21250186..21251025 9..849 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:15 Download gff for FMO12694.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21121213..21122052 9..849 99   Minus