FMO12707.5prime Sequence
1066 bp (654 high quality bases) assembled on 2013-01-29
> FMO12707.5prime
CAATCCACATGTTGACCAAACTGTTAAAGATTATCTGCACCTCGAGGCAG
TGCACCTTTGCCAAGCCGTATCAGGCGATACCAGGACCACGAGGACCCTT
TGGAATGGGTAATCTATACAATTACCTGCCCGGAATCGGATCCTATTCCT
GGCTAAGATTGCACCAAGCCGGCCAGGATAACTATGAGAAATATGGCGCA
ATTGTGCGGGAAACTATAATTCCTGGGCAGGACATTGTCTGGTTGTACGA
TCCCAAGGACATAGCTTTGCTGCTCAACGAGCGGGATTGTCCGCAGCGAA
GAAGTCACCTGGCACTGGCTCAATATCCCAAGAGCCGACCGGATGTCTAT
AAAACCACCGGCTTGCTGCCCACCAATGGTCCGGAATGGTGGCGTATACG
TGCCCAGGTGCAAAAGGAGCTGAGTGCACCAAAGAGTGTGCGGAACTTTG
TTCGCCAAGTGGATGGAGTGACCAAGGAGTTCATTAAATTTCTACAAGAA
TCTCGCAATGGTGGTGCCATTGATATGCTGCCCAAGCTCACCAGATTGAA
TTTGGAATTAACCTGTTTGCTTACCTTTGGAGCTCGTCTGCAGTCTTTTA
CTGCCCAGGAACAAGATCCTAGATCCCGATCCACACGCTTGATGGATGCG
GCTGAGACCACCAATAGCTGCATCCTGCCCACAGATCAGGGCCTCCAGCT
GTGGCGATTTCTGGATACACCTAGCTTTCACAAACTAAGCCAGGCCCAAT
CATATATGGAGAGTGTGGCCCTGGAGCTAGTGGAGGAGAATGTTAGGAAT
GGTTCAGTGGGATCTTCACTGATCTCGGCTTATGTAAAAAATCCCGAGCT
TGATCGCAGTGACGTGGTGGGCACTGCTGCAGATTTCTCTTGGCTGGCAT
CGATACCACTTCGTATGCCTCGACATTTCTACTCTATCACATAGCACGAA
ATCAGAGATGCAGCAAAACTGCACGAGAAGCCAAGAAAGTGCTTCTGATT
GCTCGACGAGCTATCATGATTGCCTTACGAATAGAATGTCACTATACGAG
GGCTGACTCCAAGGAT
FMO12707.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dib-RA | 1975 | CG12028-RA | 49..1112 | 9..1065 | 4720 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4062340..4062889 | 9..558 | 2675 | 99.1 | Plus |
| 3L | 28110227 | 3L | 4063030..4063477 | 559..1002 | 1875 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:07 has no hits.
FMO12707.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:56 Download gff for
FMO12707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 33..1008 | 2..977 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:38 Download gff for
FMO12707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 45..1020 | 2..977 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:00 Download gff for
FMO12707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 45..1020 | 2..977 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:00 Download gff for
FMO12707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4062336..4062889 | 2..558 | 98 | -> | Plus |
| 3L | 4063030..4063451 | 559..977 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:38 Download gff for
FMO12707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4062336..4062889 | 2..558 | 98 | -> | Plus |
| arm_3L | 4063030..4063451 | 559..977 | 97 | == | Plus |
