FMO12708.5prime Sequence
632 bp (632 high quality bases) assembled on 2013-01-29
> FMO12708.5prime
CAGTCGACATGTTCCGCACTTTTCCTCTGCTCTGTTTGCTGTTCCTTACG
GCTGTCCGTTCCGAAAACTGTGATCAGGATGCCGGTGCCACGCTATATTG
TCGCGGTGAACGAGCTCTGCGAAATGTCTTGCGGAATTTAAATCGCAGTG
ATAAACCCCTTGTGGTGATTAGAGGATTGGAGATAGTTCCGCTGCAGAAC
AATTCAATTTCTGATGAGGAGCCGGATCAGGAGCAGGGTCTTTTGGACAG
TCTATCCTTCTATCTGCGCACCCACGAAATCAATGTAAAGCTGGCAGATC
TCCTGGAGGACGAGTCCCAAGTTTCAGAAGCCCGCAAAAAGGACAAGGGC
CAGGGAATGCTGTTGGCAATGGCTCTGATGTTTGGCAAGATGATGGCCGT
AATGGGGTTGGGCGGCATCGCGGCATTGGCCATGAAGGCACTGGGCGTGT
CCTTGGTGGCTCTGATGATGGCCGGGATGCTGGGTCTTAAGACAGCCGCC
CAGCATGGCGGAGAGTCTAGTCACAGCATATCGTATGTGACCGGCGAGGG
ACATCACCACAAACGGAGGCGCCGCTCGTCCGGCCAACAACCCTTGGCTT
ACAGAGGCTGGGACGCAAGCTTTCTAGACCAT
FMO12708.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi5-RA | 892 | CG15590-RA | 193..800 | 7..614 | 3040 | 100 | Plus |
| Osi5-RB | 889 | CG15590-RB | 193..797 | 7..614 | 2985 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6227704..6228024 | 7..327 | 1605 | 100 | Plus |
| 3R | 32079331 | 3R | 6228443..6228736 | 321..614 | 1470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:14 has no hits.
FMO12708.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:57 Download gff for
FMO12708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 304..923 | 1..620 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:42 Download gff for
FMO12708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 187..806 | 1..620 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:03 Download gff for
FMO12708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 187..806 | 1..620 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:03 Download gff for
FMO12708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6227698..6228024 | 1..327 | 98 | -> | Plus |
| 3R | 6228450..6228742 | 328..620 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:42 Download gff for
FMO12708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2053420..2053746 | 1..327 | 98 | -> | Plus |
| arm_3R | 2054172..2054464 | 328..620 | 98 | | Plus |
