FMO12709.5prime Sequence
503 bp (503 high quality bases) assembled on 2013-01-29
> FMO12709.5prime
CAGTCGACATGCACCGATCACACCCGAGTATCAGTCGTCGCAAGCATCTC
ATGAAGGAGATGATGGAGGACGACTACGCGCTGCCCACAGAAACTCAGCA
GATTGCGCGGGTCATCAGCAGTCGGGGCAACAATCTCCACGAGGTGGAGA
CCGTGGACGAAACGTTCCTTGTTTCGATGCCCAACAAATTCCGCAAGAGC
ATGTGGGTGAAACGTGGCGACTTTCTGCTGGTCGAACCGATTGAGGAGGG
CGATAAAGTCAAAGCCGAGATTTGCAAAATACTCACACCCGAACATATAA
AGGAATACACAAAAGCTGCAATTTGGCCGGATAAATTCACAAAGAAACCT
GTACAGGAGGAAGCCACCAGCCAAAACAAAGACGACTCCGATTTCGAGGA
TGATCTCCTGCCCAATACAAATCGGCCTGTAAATCGCGATTCCTCCGACG
AAGAGGAAGATGAGGAAACATCCAGCGAAGAGGACGCAAGCTTTCTAGAC
CAT
FMO12709.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31957-RB | 885 | CG31957-RB | 124..600 | 9..485 | 2385 | 100 | Plus |
CG31957-RA | 676 | CG31957-RA | 124..600 | 9..485 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3871556..3871870 | 485..171 | 1575 | 100 | Minus |
2L | 23513712 | 2L | 3872173..3872335 | 171..9 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:20 has no hits.
FMO12709.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:58 Download gff for
FMO12709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 117..604 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:46 Download gff for
FMO12709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 117..604 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:08 Download gff for
FMO12709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 117..604 | 1..489 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:08 Download gff for
FMO12709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3871552..3871869 | 172..489 | 99 | <- | Minus |
2L | 3872173..3872339 | 1..171 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:46 Download gff for
FMO12709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3871552..3871869 | 172..489 | 99 | <- | Minus |
arm_2L | 3872173..3872339 | 1..171 | 97 | | Minus |