FMO12712.5prime Sequence
1081 bp (983 high quality bases) assembled on 2013-01-29
> FMO12712.5prime
CAGTCGACATGGCCGTTGTTTGGGACATGAGTCAATGGACGCAGGCGTGG
CGGATCGACAGTCTGCATCCGACGGTCCGCTCGAGCGGTACAAGAACCAC
AACGAGCGGTACAATCATGTACGGTCGCACGTCGGTCGGTGCAAATCAAT
CCGTGACGAATGGCAACTCAAATAGTGGCGCAAATAGCGGCGGTGGTGCC
AGTGGTGGTGCCCAGGGACACGATAAACTGAAAATTGGCTTCTGCACGGA
CCTGGATAAATCGGTTTTGGTCAACAATTTCGAGAAACGTGGCTGGCATC
AGGTGAATGGCGATGATGATTGGCATTTCTATTGGGCCGGAGTGCAAACC
TGCCGGAATATATTCAGTGTGGATAGTGGTTATAGGATGCACGATAACCA
GATGATCAATCATTTTCCCAATCACTATGAATTATCACGCAAGGATTTAC
TGGTCAAGAACATCAAGCGTTATCGCAAGGATCTCGAGAGGGATGGCAAT
CCATTGGCGGAGAAAACAGAGTCCAATAACTCCAGTGGCACCAGATATCT
TTATTTGGATTTTGTGCCAACAACTTTTGTCCTGCCAGCCGATTATAATA
TGTTCGTGGAGGAGTATCGCAAGTTTCCGCTGAGTACGTGGATTATGAAA
CCCTGTGGAAAATCCCAAGGAGCGGGTATATTCCTTATAAACAAACTATC
CAAACTCAAGAAGTGGTCAAGAGAGGCCAAGGGTCCTTTTCATCCACAAA
TAGCCAAGGAATCGTATGTGATATCCAGATACATAGACAATCCACTATTG
ATTGGTGGTAAAAAATTTGATCTTCGTCTATATGTTCTAGTCGCTTCGTT
CAGACCCCTGAAAGCTTATCTTTTTAAGCAGGGATTCTGCCGTTTTTGTA
CTGTAAATACGATACTAGTGTTACGGAACTGGAATATATGTACGTCCATT
CTGACAATGTGGGTGTGCAGAACATGGTGGCGAATACATACCCTACATGG
TGCAAGTGGTCTGTACAAATCTTGACCTCTATTTGGAAGAACTCGGAAAG
AAGTACGGATCGTTGTTGAACCATATCCTGG
FMO12712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32238-RA | 2030 | CG32238-RA | 395..1482 | 7..1081 | 4995 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4648670..4649707 | 7..1039 | 4775 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:27 has no hits.
FMO12712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:53 Download gff for
FMO12712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 389..1447 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:14 Download gff for
FMO12712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 389..1447 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:37 Download gff for
FMO12712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 389..1447 | 1..1053 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:37 Download gff for
FMO12712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4648664..4649722 | 1..1053 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:14 Download gff for
FMO12712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4648664..4649722 | 1..1053 | 98 | | Plus |
