FMO12714.5prime Sequence
1151 bp (1036 high quality bases) assembled on 2013-01-29
> FMO12714.5prime
CAGTCGACATGGAAAAAAAGATCTCATCGTCATCCCAGCCCCGGATTTTA
AAAAAGAAGCACTTCAGGGTTAAGCATCAAAAGGTTAAATTATTTAGAGC
CAATGAACCAATTTTAAGTGTGTTCATGTGGGGAATAAATCACACTATTA
ATGAATTAAGTCACGTTAATATACCTGTAATGCTTTTGCCGGACGATTTT
CGAGCTTATTCTAAAATTAAGGTGGATAATCATCTATTTAATAAAGAAAA
CATGCCGTCACATTTCAAAGTCAAGGAATATTGCCCCCTTGTGTTTCGAA
ATTTACGTGAAAGATTTGGCGTTGATGATGTTGATTACCGCGAGTCCTTA
ACTCGATCCCAACCTATTCAAATTGATTCGTCTGGAAAATCAGGAGCGCA
ATTTTATCAGAGTTATGATAAGTTTTTTATAATAAAAAGTTTGACATCGG
AAGAAATTGAACGAATGCACGCATTTTTAAAGCAATACCATCCGTACGTT
GTGGAGAGACACGGAAAAACGCTGTTACCTCAATACTTGGGAATGTATCG
TATCACTGTAGAAAGCGTGCAATATTACTTCGTTGTCATGAGGAATGTTT
TCAGCTCCCACTTGACAATACACAAAAAGTTTGATTTAAAAGGTAGCACC
GTTGATCGGGAAGCATCAGAAAAGGAACTTGAAAAAAATTTGCCGACTTT
CAAGGACAATGATTTTATAAAACAAAAAGTGAAATTAGACATTGGAAAGG
AAGCTAAGGACAAACTAATGGACACGCTGAGCAACGATGTGGATCTTTTA
ACCAAGTTGCACATTATGGATTACTCTTTGTTGGTCGGCGTGCATGACTG
TGTTCGTGCAGAGGAGGAGCTTTGCAGGAGATAATATACTAACTGTTGGT
CGCAGTGAGAACAGCGAAAGCGAGGATGCGATAGCGGGGAACGCTGGACG
TATAACACTCTCCCGATTCTCAGAGGTGCACAGTATAAGGAAGTCGTTTA
TGAGTTGATATATATGACATCCAAGTATGAAAGAAAACTGAAATTTACTT
ATTGCCATTATTGACGTTCTACCAAATTGGAGTTAAAAACTGCAGCTAAG
CAGCAACTGTTAAAATGGCAGTATGTTGAGCGTATTCACGTGAACCTGAA
C
FMO12714.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PIP4K-RB | 1443 | CG17471-RB | 112..1253 | 9..1129 | 5095 | 97.5 | Plus |
PIP4K-RA | 1493 | CG17471-RA | 162..1303 | 9..1129 | 5095 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
4 | 1348131 | 4 | 1195842..1196091 | 494..245 | 1250 | 100 | Minus |
4 | 1348131 | 4 | 1195428..1195596 | 794..626 | 845 | 100 | Minus |
4 | 1348131 | 4 | 1196320..1196457 | 146..9 | 690 | 100 | Minus |
4 | 1348131 | 4 | 1195660..1195791 | 625..494 | 660 | 100 | Minus |
4 | 1348131 | 4 | 1193708..1193859 | 943..795 | 610 | 98 | Minus |
4 | 1348131 | 4 | 1196165..1196262 | 244..147 | 490 | 100 | Minus |
4 | 1348131 | 4 | 1193574..1193655 | 1020..943 | 245 | 95.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:43 has no hits.
FMO12714.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:01 Download gff for
FMO12714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17471-RA | 154..1246 | 9..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:02 Download gff for
FMO12714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PIP4K-RA | 162..1254 | 9..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:19 Download gff for
FMO12714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PIP4K-RA | 162..1254 | 9..1089 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:19 Download gff for
FMO12714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
4 | 1195842..1196091 | 245..494 | 100 | <- | Minus |
4 | 1196165..1196262 | 147..244 | 100 | <- | Minus |
4 | 1196320..1196457 | 9..146 | 100 | | Minus |
4 | 1195428..1195596 | 626..794 | 100 | <- | Minus |
4 | 1195660..1195790 | 495..625 | 100 | <- | Minus |
4 | 1193560..1193654 | 944..1033 | 92 | <- | Minus |
4 | 1193708..1193859 | 795..943 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:02 Download gff for
FMO12714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_4 | 1214186..1214280 | 944..1033 | 92 | <- | Minus |
arm_4 | 1214334..1214485 | 795..943 | 98 | <- | Minus |
arm_4 | 1216054..1216222 | 626..794 | 100 | <- | Minus |
arm_4 | 1216286..1216416 | 495..625 | 100 | <- | Minus |
arm_4 | 1216468..1216717 | 245..494 | 100 | <- | Minus |
arm_4 | 1216791..1216888 | 147..244 | 100 | <- | Minus |
arm_4 | 1216946..1217083 | 9..146 | 100 | | Minus |