Clone FMO12714 Report

Search the DGRC for FMO12714

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:14
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17471-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12714.5prime Sequence

1151 bp (1036 high quality bases) assembled on 2013-01-29

> FMO12714.5prime
CAGTCGACATGGAAAAAAAGATCTCATCGTCATCCCAGCCCCGGATTTTA
AAAAAGAAGCACTTCAGGGTTAAGCATCAAAAGGTTAAATTATTTAGAGC
CAATGAACCAATTTTAAGTGTGTTCATGTGGGGAATAAATCACACTATTA
ATGAATTAAGTCACGTTAATATACCTGTAATGCTTTTGCCGGACGATTTT
CGAGCTTATTCTAAAATTAAGGTGGATAATCATCTATTTAATAAAGAAAA
CATGCCGTCACATTTCAAAGTCAAGGAATATTGCCCCCTTGTGTTTCGAA
ATTTACGTGAAAGATTTGGCGTTGATGATGTTGATTACCGCGAGTCCTTA
ACTCGATCCCAACCTATTCAAATTGATTCGTCTGGAAAATCAGGAGCGCA
ATTTTATCAGAGTTATGATAAGTTTTTTATAATAAAAAGTTTGACATCGG
AAGAAATTGAACGAATGCACGCATTTTTAAAGCAATACCATCCGTACGTT
GTGGAGAGACACGGAAAAACGCTGTTACCTCAATACTTGGGAATGTATCG
TATCACTGTAGAAAGCGTGCAATATTACTTCGTTGTCATGAGGAATGTTT
TCAGCTCCCACTTGACAATACACAAAAAGTTTGATTTAAAAGGTAGCACC
GTTGATCGGGAAGCATCAGAAAAGGAACTTGAAAAAAATTTGCCGACTTT
CAAGGACAATGATTTTATAAAACAAAAAGTGAAATTAGACATTGGAAAGG
AAGCTAAGGACAAACTAATGGACACGCTGAGCAACGATGTGGATCTTTTA
ACCAAGTTGCACATTATGGATTACTCTTTGTTGGTCGGCGTGCATGACTG
TGTTCGTGCAGAGGAGGAGCTTTGCAGGAGATAATATACTAACTGTTGGT
CGCAGTGAGAACAGCGAAAGCGAGGATGCGATAGCGGGGAACGCTGGACG
TATAACACTCTCCCGATTCTCAGAGGTGCACAGTATAAGGAAGTCGTTTA
TGAGTTGATATATATGACATCCAAGTATGAAAGAAAACTGAAATTTACTT
ATTGCCATTATTGACGTTCTACCAAATTGGAGTTAAAAACTGCAGCTAAG
CAGCAACTGTTAAAATGGCAGTATGTTGAGCGTATTCACGTGAACCTGAA
C

FMO12714.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
PIP4K-RB 1443 CG17471-RB 112..1253 9..1129 5095 97.5 Plus
PIP4K-RA 1493 CG17471-RA 162..1303 9..1129 5095 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1195842..1196091 494..245 1250 100 Minus
4 1348131 4 1195428..1195596 794..626 845 100 Minus
4 1348131 4 1196320..1196457 146..9 690 100 Minus
4 1348131 4 1195660..1195791 625..494 660 100 Minus
4 1348131 4 1193708..1193859 943..795 610 98 Minus
4 1348131 4 1196165..1196262 244..147 490 100 Minus
4 1348131 4 1193574..1193655 1020..943 245 95.1 Minus
Blast to na_te.dros performed on 2014-11-28 18:39:43 has no hits.

FMO12714.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:01 Download gff for FMO12714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17471-RA 154..1246 9..1089 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:02 Download gff for FMO12714.5prime
Subject Subject Range Query Range Percent Splice Strand
PIP4K-RA 162..1254 9..1089 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:19 Download gff for FMO12714.5prime
Subject Subject Range Query Range Percent Splice Strand
PIP4K-RA 162..1254 9..1089 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:19 Download gff for FMO12714.5prime
Subject Subject Range Query Range Percent Splice Strand
4 1195842..1196091 245..494 100 <- Minus
4 1196165..1196262 147..244 100 <- Minus
4 1196320..1196457 9..146 100   Minus
4 1195428..1195596 626..794 100 <- Minus
4 1195660..1195790 495..625 100 <- Minus
4 1193560..1193654 944..1033 92 <- Minus
4 1193708..1193859 795..943 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:02 Download gff for FMO12714.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 1214186..1214280 944..1033 92 <- Minus
arm_4 1214334..1214485 795..943 98 <- Minus
arm_4 1216054..1216222 626..794 100 <- Minus
arm_4 1216286..1216416 495..625 100 <- Minus
arm_4 1216468..1216717 245..494 100 <- Minus
arm_4 1216791..1216888 147..244 100 <- Minus
arm_4 1216946..1217083 9..146 100   Minus