FMO12718.5prime Sequence
1129 bp (1042 high quality bases) assembled on 2013-01-29
> FMO12718.5prime
CAGTCGACATGGCGTCCGCAGGAAAGAAGGGCAAAAAGAATAAAGGAACA
GTTATCTCCTTGCAATCATTTCTATGTAATTCTGACGCTCCAGTCGGAAC
AACCCAAGTCTCAAAAAAAATACGAAATTTAGATGGCGATGATAGCGATG
ATGGAAGTGGTACATTGCCGTTGGTTTATCAGCTTCCAACCGCTCCGAGG
GCAAATCGGATATTCGACGATAATTCTATTCCTCATAAAGCCCCATTTAT
TGCTTATATCAATAATTTACCATTTGACGCAAATGAAGATGACCTCTACG
AGTTCTTTGAAGGTATTAATTTAATATCTCTGAGACTACCAAGAGAAGAT
GGCGAAAATGGTCGTTCCAGAGGCTTTGGCTATGTGGAGTTGGAAAATCG
AGAGGATTTAATTCATGTACTTAGCTTGCCAGACCCCTCTATTAAAGGTC
GCCGCATTCGCATTGAGCTATCGAATGAAAACGACCAGCAAAGCCGCCAA
AAAAGTAATAGGCGGTTTGATGGTTTTGGAAATAATGGAGATAATAGGGA
TTCCGGAAATTGGAGGCGAGACAGCCAAAACAACGGCAGTAACTTTGGTT
ATTCTTCCAATTTTGAAAGAAGCTTTAATAGAGAGAGAAAATCTTTACCA
GATAGAGATGATGTGAACACTCCTGGATCTTGGCGCACGAGCGCAAGGCC
GCAATCTATTGATACTTCCCCTACACGCAGAGAAGTTGAACAAGTATCTG
AAAAATATCGCGAAGGTCGAGTCAAAATAGCAGACAGATATTCCCGAGAA
GAGACATCCAAAGTTGAAGAAGAAGGCCAAAATTGAATTTAAAACCAAGA
CTTTACCATTGCCAGATGTAAAGACATTGATTCGAAAATGTGACGTTGAT
GATTTAATTTGGATAACAAGGCGGACTTCATCATTAAACGTGTTTGGGTC
TGCAAACGGTAGATACAGCAGCAGGAGTGAGATTGAGCAAGATTGCTCTC
GCTCGAAACAGATAGGGCGCAGAGACAGGTTTAAATGAAAACTGCGAGCT
CAGTGAAAAAATGTATATTGAGTCTAATGCAAGTAGTGGCCACGATCAGG
AATCTCAAGAGGAAATTATTATTGTCAGG
FMO12718.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-4B-RF | 1443 | CG10837-RF | 69..1123 | 9..1041 | 4765 | 97.9 | Plus |
eIF-4B-RA | 1651 | CG10837-RA | 69..1123 | 9..1041 | 4765 | 97.9 | Plus |
eIF-4B-RB | 1504 | CG10837-RB | 69..1123 | 9..1041 | 4765 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 27547885..27548849 | 973..19 | 4365 | 98.8 | Minus |
3L | 28110227 | 3L | 27856974..27857938 | 973..19 | 4365 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:40:27 has no hits.
FMO12718.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:04 Download gff for
FMO12718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RE | 67..1142 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:26 Download gff for
FMO12718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 61..1136 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:38 Download gff for
FMO12718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 61..1136 | 1..1051 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:38 Download gff for
FMO12718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 27856881..27857938 | 19..1051 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:26 Download gff for
FMO12718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2RHet | 2902091..2903148 | 19..1051 | 97 | | Plus |