Clone FMO12718 Report

Search the DGRC for FMO12718

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:18
Vector:pMK33-CFH-BD
Associated Gene/TranscripteIF-4B-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12718.5prime Sequence

1129 bp (1042 high quality bases) assembled on 2013-01-29

> FMO12718.5prime
CAGTCGACATGGCGTCCGCAGGAAAGAAGGGCAAAAAGAATAAAGGAACA
GTTATCTCCTTGCAATCATTTCTATGTAATTCTGACGCTCCAGTCGGAAC
AACCCAAGTCTCAAAAAAAATACGAAATTTAGATGGCGATGATAGCGATG
ATGGAAGTGGTACATTGCCGTTGGTTTATCAGCTTCCAACCGCTCCGAGG
GCAAATCGGATATTCGACGATAATTCTATTCCTCATAAAGCCCCATTTAT
TGCTTATATCAATAATTTACCATTTGACGCAAATGAAGATGACCTCTACG
AGTTCTTTGAAGGTATTAATTTAATATCTCTGAGACTACCAAGAGAAGAT
GGCGAAAATGGTCGTTCCAGAGGCTTTGGCTATGTGGAGTTGGAAAATCG
AGAGGATTTAATTCATGTACTTAGCTTGCCAGACCCCTCTATTAAAGGTC
GCCGCATTCGCATTGAGCTATCGAATGAAAACGACCAGCAAAGCCGCCAA
AAAAGTAATAGGCGGTTTGATGGTTTTGGAAATAATGGAGATAATAGGGA
TTCCGGAAATTGGAGGCGAGACAGCCAAAACAACGGCAGTAACTTTGGTT
ATTCTTCCAATTTTGAAAGAAGCTTTAATAGAGAGAGAAAATCTTTACCA
GATAGAGATGATGTGAACACTCCTGGATCTTGGCGCACGAGCGCAAGGCC
GCAATCTATTGATACTTCCCCTACACGCAGAGAAGTTGAACAAGTATCTG
AAAAATATCGCGAAGGTCGAGTCAAAATAGCAGACAGATATTCCCGAGAA
GAGACATCCAAAGTTGAAGAAGAAGGCCAAAATTGAATTTAAAACCAAGA
CTTTACCATTGCCAGATGTAAAGACATTGATTCGAAAATGTGACGTTGAT
GATTTAATTTGGATAACAAGGCGGACTTCATCATTAAACGTGTTTGGGTC
TGCAAACGGTAGATACAGCAGCAGGAGTGAGATTGAGCAAGATTGCTCTC
GCTCGAAACAGATAGGGCGCAGAGACAGGTTTAAATGAAAACTGCGAGCT
CAGTGAAAAAATGTATATTGAGTCTAATGCAAGTAGTGGCCACGATCAGG
AATCTCAAGAGGAAATTATTATTGTCAGG

FMO12718.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-4B-RF 1443 CG10837-RF 69..1123 9..1041 4765 97.9 Plus
eIF-4B-RA 1651 CG10837-RA 69..1123 9..1041 4765 97.9 Plus
eIF-4B-RB 1504 CG10837-RB 69..1123 9..1041 4765 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 27547885..27548849 973..19 4365 98.8 Minus
3L 28110227 3L 27856974..27857938 973..19 4365 98.8 Minus
Blast to na_te.dros performed on 2014-11-28 18:40:27 has no hits.

FMO12718.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:04 Download gff for FMO12718.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF-4B-RE 67..1142 1..1051 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:26 Download gff for FMO12718.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF-4B-RB 61..1136 1..1051 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:38 Download gff for FMO12718.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF-4B-RB 61..1136 1..1051 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:38 Download gff for FMO12718.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 27856881..27857938 19..1051 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:26 Download gff for FMO12718.5prime
Subject Subject Range Query Range Percent Splice Strand
2RHet 2902091..2903148 19..1051 97   Plus