FMO12724.5prime Sequence
554 bp (554 high quality bases) assembled on 2013-01-29
> FMO12724.5prime
CAGTCGACATGTCGTCGAACAGCTCGGAGTCCCTAAACAAGATGAAGTCT
CTTGTGGGGAAGATGATCTTCATGCAAGTCACCGAACATCTTTTCCTAAG
GGCGCAGCAGTTGCTGGATTCTGATGTCAGCATAGAAGAACGTGTGCGCA
GAATGGAGGTCCTTAACAACAACATGAAGTGGTTCAATTCCGAGCGTACA
CGCATCCTAGAGCAGTTGCAGCTGAATATATTCGGTCAGATTTCGGTGGA
GCATCATAATGCGATGAATATGAATGAGAATCTGTATGAGCTGCGCGAGG
GACTAGACGGACTCAGCCGTAGGATGGAAAGTATGCAAGAGGACATTACC
TGTTCGATTTGCCTCTCACCCTGGTCTTCCAATGGCAGACATCGAGTGGT
CTCTCTCCGATGTGGACACCTATTCGGGAATAGCTGCATCATAACTGCCA
TCCGCAGATCACATCGGTGCCCGATATGCAGGCGTAGGGCTCTACACGCT
GATGTGCGCAGGATATTCAGTCGACGAATAAGTCATGCAAGCTTTCTAGA
CCAT
FMO12724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13481-RC | 783 | CG13481-RC | 65..592 | 9..536 | 2610 | 99.6 | Plus |
| CG13481-RB | 714 | CG13481-RB | 65..592 | 9..536 | 2610 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14369116..14369643 | 536..9 | 2610 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:32 has no hits.
FMO12724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:59 Download gff for
FMO12724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 56..595 | 1..540 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:55 Download gff for
FMO12724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 56..595 | 1..540 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:13 Download gff for
FMO12724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 56..595 | 1..540 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:13 Download gff for
FMO12724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14369113..14369647 | 1..540 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:55 Download gff for
FMO12724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14362213..14362747 | 1..540 | 98 | | Minus |
