FMO12725.5prime Sequence
506 bp (506 high quality bases) assembled on 2013-01-29
> FMO12725.5prime
CAGTCGACATGCAGTATACTCAGCTCCTGAGAGTTTTGTGCTCCATCGTG
ATCATATCCTATATGGCAGTCCATGTTCTCGGGGACATAAAATGCAATGT
GTGTCAACCAAATCATGTCAAGTGCCTGAACGAGACCCACTTTAGTTTTT
GCCTCGACGCCGTTTCGTCGGATCAGGTTATCCAGTGTCCCGACGGCCAG
GTTTGCACCAGCCTCCTGAAGATCTGCCTGCCCAAGGGATCGACTCCAGC
TTCCTGCACTCCAGATGCCGAAATATCGTGTCCTCCTTGCAGTGGAGCAG
GTCTATTCGTCTGCACTAGCCGCACCACCTTCCAAATGTGTGATGAAGGC
AAGCTCATCGGCCAAGTAACGAAGTGCAAGGATAACACTTTCTGCTCCAT
GAAGTCGAAAAAGTTTTGCGTAGATCAGTGTGAAATAACGAAATCTCAAA
ATGGATTCGAGTGCGACAGAGAGTCCCCCTTGGATGTAGCAAGCTTTCTA
GACCAT
FMO12725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32023-RA | 525 | CG32023-RA | 5..484 | 9..488 | 2400 | 100 | Plus |
CG13311-RA | 568 | CG13311-RA | 328..429 | 306..407 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8803643..8804093 | 488..38 | 2255 | 100 | Minus |
3L | 28110227 | 3L | 8801679..8801780 | 407..306 | 180 | 78.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:29:52 has no hits.
FMO12725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:43 Download gff for
FMO12725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32023-RA | 1..487 | 5..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:58 Download gff for
FMO12725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32023-RA | 1..487 | 5..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:12 Download gff for
FMO12725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32023-RA | 1..487 | 5..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:12 Download gff for
FMO12725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8803644..8804092 | 39..487 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:58 Download gff for
FMO12725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8796744..8797192 | 39..487 | 100 | <- | Minus |