FMO12726.5prime Sequence
374 bp (374 high quality bases) assembled on 2013-01-29
> FMO12726.5prime
CAGTCGACATGCGTTTGACAATCTTATGTATTTTTTGCCTGGCAACTGTG
ATCCTGGCTATCGACATGGACTCGGATTCACTACAGGAACAGTACGAAAG
GGAGCAGTACAATATTCGCAAAAAAATTTGCCTTCAAAGTTCGGAATACG
GAAAGTGCAAAGGTCGTCGGAAACTTTGGTTCTACAACCCCAAGAAATCC
AAGTGTCAAGTTTTTATCTACTCGAATTGTGGTGGCAATGGCAACCTTTT
CTATACCAAGGAAAGTTGCGTGGAATTTTGTGGCAAATACGACTGGAAGA
AGGTGCGAAAGACAGGACTTCGACGTTCAGCTGATTATAGAAGAAAAGAT
GGGAATGCAAGCTTTCTAGACCAT
FMO12726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42827-RD | 425 | CG42827-RD | 11..358 | 9..356 | 1740 | 100 | Plus |
CG42827-RC | 558 | CG42827-RC | 144..491 | 9..356 | 1740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23373301..23373533 | 124..356 | 1165 | 100 | Plus |
3R | 32079331 | 3R | 23373120..23373234 | 9..123 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:29:58 has no hits.
FMO12726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:44 Download gff for
FMO12726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42827-RC | 136..496 | 1..364 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:01 Download gff for
FMO12726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42827-RC | 136..496 | 1..364 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:16 Download gff for
FMO12726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42827-RC | 136..496 | 1..364 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:16 Download gff for
FMO12726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23373112..23373234 | 1..123 | 96 | -> | Plus |
3R | 23373301..23373538 | 124..364 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:01 Download gff for
FMO12726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19198834..19198956 | 1..123 | 96 | -> | Plus |
arm_3R | 19199023..19199260 | 124..364 | 98 | | Plus |