Clone FMO12728 Report

Search the DGRC for FMO12728

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:28
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31806-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12728.5prime Sequence

479 bp (479 high quality bases) assembled on 2013-01-29

> FMO12728.5prime
CAGTCGACATGAGCAACAAGAAATCAAAGTTGGTGCAATCGCTGGAGGAG
TCGACGCCGCCCATCGATGAAGAGGACGTCATCCGCTTGATTGCTGACCA
AATTCGCCAGCCTACGAGCGATCCAGTTGATATTAATTTAAGCAACAAGG
AGAATCTAAGCATTCTGCATCTCGAGGATGCCTTTAAATTCAAAAATTCG
ATGCAAAGCTTTCACGTGTCGCCCACTGCTGAATCCTTAAACGAAGTCAT
GCCAGTGAAGGACGAGGATCTGGGCGAGATGCTGGATGCCCTGACCGACG
TGATCCTGGTTGAGGAAGACGATGAGGACGATGGCGATGATGATGATTAT
GAAGAAGAAGAGGAAGATGGTGACGACGAAGAGAATGAATTCGATGAAGA
GGACGCGGATGATGTCGACGAAAATGCTCCAAAAGCGAACTTAAATTCAG
GCTGGATATTTGCAAGCTTTCTAGACCAT

FMO12728.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31806-RB 657 CG31806-RB 101..553 9..461 2265 100 Plus
CG31806-RA 606 CG31806-RA 101..553 9..461 2265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16985078..16985530 9..461 2265 100 Plus
Blast to na_te.dros performed 2014-11-28 18:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 1596..1694 267..362 126 64 Plus

FMO12728.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:45 Download gff for FMO12728.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31806-RA 22..480 6..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:09 Download gff for FMO12728.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31806-RA 98..556 6..465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:24 Download gff for FMO12728.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31806-RA 98..556 6..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:24 Download gff for FMO12728.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16985075..16985533 6..465 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:09 Download gff for FMO12728.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16985075..16985533 6..465 99   Plus