Clone FMO12730 Report

Search the DGRC for FMO12730

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14321-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12730.5prime Sequence

389 bp (389 high quality bases) assembled on 2013-01-29

> FMO12730.5prime
CAGTCGACATGACGCGTCCTGCGATTTTCCTCGTTGTCTGCTCAATAACT
CTGCTTAATTCCGTCAATGGCTACAAGGAGATCCATGGAATGAATGGCAA
GCTGTTTCCGAAGGCGGCGACGTTTAATTTTCCCGAATATGCTTACAAGG
AGACCAGCAAAAATGAAATCACTTACCACGAACTGGAGGTGACCTGTGAC
CAGCACGCCCAGTGCATTGGCCTTAGTCCGGTGGGCGTGGCCAAGATCAA
CTGCATCCGACAGTGCATTTCGCCATCGTGCTACCAGGACATCTATGCCT
TCAACGAGCTGGAGGAGGGCGAAATCGACGCCAGGCTGAACTCCTTTAAG
GGATGCGTTATCCAACGCATGGCAAGCTTTCTAGACCAT

FMO12730.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14321-RA 702 CG14321-RA 41..403 9..371 1815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17733876..17734082 165..371 1035 100 Plus
3R 32079331 3R 17733638..17733794 9..165 785 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:30:21 has no hits.

FMO12730.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:47 Download gff for FMO12730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14321-RA 33..405 2..377 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:17 Download gff for FMO12730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14321-RA 35..407 2..377 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:29 Download gff for FMO12730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14321-RA 35..407 2..377 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:29 Download gff for FMO12730.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17733632..17733793 2..164 97 -> Plus
3R 17733876..17734086 165..377 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:17 Download gff for FMO12730.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13559354..13559515 2..164 97 -> Plus
arm_3R 13559598..13559808 165..377 98   Plus