Clone FMO12733 Report

Search the DGRC for FMO12733

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:33
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15912-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12733.5prime Sequence

764 bp (764 high quality bases) assembled on 2013-01-29

> FMO12733.5prime
CAGTCGACATGTCGTTGACTTCGCAATTTGTTGCGAATTTGAAACGCTTT
CGCCTGGTGACCTTCGATGTAACGGACACGCTGCTTCGCCTGGAGGATCC
CCTTCGCCAGTACCATCAGACGGCAGAGGAGTTCGGGGTCACCGGAGTGG
ATCGCCGCCGATTGGAACAATGCTTTCGCCAGCAATTCAAGGCGATGAGC
AGCGAACATCCAAACTTTGGCCGTTACTCGCCGGGATTGGATTGGCAGCG
TTGGTGGCTTCAGCTGGTGGCTCGAACCTTTAGCTGCGTGGACCACGGTC
TGGCGCCCGAGAAGCTGGAGAAGATCGGCCAGCGGCTAATTTCCGTTTTT
CGGACCAGCGCCTGTTGGAGTCACGTGAATGGTGCCCAGGAGTTGGTGCA
GAACGTCCGAAATGCCGGCAAATGTGTGGGCATCATCTCCAATTTCGATT
CGTCACTGCCACAAGTCCTGGACGCCATGGGCTTTGCCGGCAAATTCGAT
TTCATTCTGACTTCCTACGAAGCCGGTGTTATGAAGCCCGAACGCGGTAT
CTTCGAAATTCCGCTGCAGAGATTGCAAATTCCAGCGGAGCAGGCCCTTC
ACATTGGCAACAAGTTGGATATGGACTATGAAGGTGCCCGGAATTGCGGC
TGGAGCGGTTTGCTTGTGAGCAACGCTGACAATCCCCATTCTTTTGCCAG
TCTTTCCAGTCTGTTGGAGGCCTTAAAAACCCAACCAATCCGATGGGCAA
GCTTTCTAGACCAT

FMO12733.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15912-RA 888 CG15912-RA 5..742 9..746 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4549074..4549811 9..746 3690 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:30:41 has no hits.

FMO12733.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:48 Download gff for FMO12733.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 1..745 5..750 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:28 Download gff for FMO12733.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 1..745 5..750 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:40 Download gff for FMO12733.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 1..745 5..750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:40 Download gff for FMO12733.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4549074..4549814 9..750 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:28 Download gff for FMO12733.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4443107..4443847 9..750 99   Plus