Clone FMO12734 Report

Search the DGRC for FMO12734

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:34
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34442-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12734.5prime Sequence

761 bp (761 high quality bases) assembled on 2013-01-29

> FMO12734.5prime
CAGTCGACATGTACAGAACTTTGATATTTGCACCCTTTCTTTTTCTCTGT
GCCATAATAAATAACTTCAATTTGGTTAAGTCTGCGCTGCTTTTCACCAC
AAACTCCGAGTATGGGATATTCATGGCCATATCGGTGCCGATTGGCTTGC
CACATCGCAATGTCTTTCTGTCCTATAACTACGAGTTTAATTACTATCAA
CCGGAACACGTGTACAAATATCCACCGATTTTGATGGGTCAGGACTTTGA
GGACAGCTATCTCACATATCCGACAACTGGACGTGAGGCCGAAGGGCGAC
ACTGCCAGAATTGCACAGATTGGAAAATAGAGGGAAATATAAATAGCACC
TCATCAAATAATAACTCAACTAAAGCTGCTTCGCGCGAAAAACGTGGTCT
AACTCTGATGAGTCGCTCGGTATTTTATGCAATGCTAAGGGATAAATTAA
GAAGGTCAGGGTTTCCAGCTGAACCCTGTTTGCTGCGCTTGATATGCGAT
ACAAATGCTTCACAACTGGGTGAAGTTAATGGATTTTTAGGCAGCCTCGT
TCACATTATATTCAGTCCCAGCAGTTCCAAGGATGAGCACCTGCCCAATG
AGTATTACCAGGCCGAATGGGATGGTCGAGAGCAGCAGGAGTGCTCCACG
TATACCAAAAGTTGTGATCACAACATCTTGGACCTGGTTTCCGTGTCACT
GGAACAGTCTTTAAGCGATATTGTAAGCCGACGAGGGCGCAAAGCAAGCT
TTCTAGACCAT

FMO12734.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34442-RA 831 CG34442-RA 75..810 8..743 3680 100 Plus
CG34184-RA 715 CG34184-RA 397..591 431..625 180 72.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14367225..14367449 233..457 1125 100 Plus
2R 25286936 2R 14367674..14367853 564..743 900 100 Plus
2R 25286936 2R 14367040..14367163 116..239 605 99.2 Plus
2R 25286936 2R 14367500..14367612 453..565 565 100 Plus
2R 25286936 2R 14366872..14366980 8..116 545 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:29:31 has no hits.

FMO12734.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:41 Download gff for FMO12734.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34442-RA 35..782 1..750 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:45 Download gff for FMO12734.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34442-RA 69..816 1..750 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:00 Download gff for FMO12734.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34442-RA 69..816 1..750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:00 Download gff for FMO12734.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14366866..14366980 1..116 96 -> Plus
2R 14367041..14367157 117..233 100 -> Plus
2R 14367226..14367446 234..454 100 -> Plus
2R 14367502..14367612 455..565 100 -> Plus
2R 14367676..14367859 566..750 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:45 Download gff for FMO12734.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10254371..10254485 1..116 96 -> Plus
arm_2R 10254546..10254662 117..233 100 -> Plus
arm_2R 10254731..10254951 234..454 100 -> Plus
arm_2R 10255007..10255117 455..565 100 -> Plus
arm_2R 10255181..10255364 566..750 98   Plus