FMO12734.5prime Sequence
761 bp (761 high quality bases) assembled on 2013-01-29
> FMO12734.5prime
CAGTCGACATGTACAGAACTTTGATATTTGCACCCTTTCTTTTTCTCTGT
GCCATAATAAATAACTTCAATTTGGTTAAGTCTGCGCTGCTTTTCACCAC
AAACTCCGAGTATGGGATATTCATGGCCATATCGGTGCCGATTGGCTTGC
CACATCGCAATGTCTTTCTGTCCTATAACTACGAGTTTAATTACTATCAA
CCGGAACACGTGTACAAATATCCACCGATTTTGATGGGTCAGGACTTTGA
GGACAGCTATCTCACATATCCGACAACTGGACGTGAGGCCGAAGGGCGAC
ACTGCCAGAATTGCACAGATTGGAAAATAGAGGGAAATATAAATAGCACC
TCATCAAATAATAACTCAACTAAAGCTGCTTCGCGCGAAAAACGTGGTCT
AACTCTGATGAGTCGCTCGGTATTTTATGCAATGCTAAGGGATAAATTAA
GAAGGTCAGGGTTTCCAGCTGAACCCTGTTTGCTGCGCTTGATATGCGAT
ACAAATGCTTCACAACTGGGTGAAGTTAATGGATTTTTAGGCAGCCTCGT
TCACATTATATTCAGTCCCAGCAGTTCCAAGGATGAGCACCTGCCCAATG
AGTATTACCAGGCCGAATGGGATGGTCGAGAGCAGCAGGAGTGCTCCACG
TATACCAAAAGTTGTGATCACAACATCTTGGACCTGGTTTCCGTGTCACT
GGAACAGTCTTTAAGCGATATTGTAAGCCGACGAGGGCGCAAAGCAAGCT
TTCTAGACCAT
FMO12734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34442-RA | 831 | CG34442-RA | 75..810 | 8..743 | 3680 | 100 | Plus |
CG34184-RA | 715 | CG34184-RA | 397..591 | 431..625 | 180 | 72.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14367225..14367449 | 233..457 | 1125 | 100 | Plus |
2R | 25286936 | 2R | 14367674..14367853 | 564..743 | 900 | 100 | Plus |
2R | 25286936 | 2R | 14367040..14367163 | 116..239 | 605 | 99.2 | Plus |
2R | 25286936 | 2R | 14367500..14367612 | 453..565 | 565 | 100 | Plus |
2R | 25286936 | 2R | 14366872..14366980 | 8..116 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:29:31 has no hits.
FMO12734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:41 Download gff for
FMO12734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34442-RA | 35..782 | 1..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:45 Download gff for
FMO12734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34442-RA | 69..816 | 1..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:00 Download gff for
FMO12734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34442-RA | 69..816 | 1..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:00 Download gff for
FMO12734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14366866..14366980 | 1..116 | 96 | -> | Plus |
2R | 14367041..14367157 | 117..233 | 100 | -> | Plus |
2R | 14367226..14367446 | 234..454 | 100 | -> | Plus |
2R | 14367502..14367612 | 455..565 | 100 | -> | Plus |
2R | 14367676..14367859 | 566..750 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:45 Download gff for
FMO12734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10254371..10254485 | 1..116 | 96 | -> | Plus |
arm_2R | 10254546..10254662 | 117..233 | 100 | -> | Plus |
arm_2R | 10254731..10254951 | 234..454 | 100 | -> | Plus |
arm_2R | 10255007..10255117 | 455..565 | 100 | -> | Plus |
arm_2R | 10255181..10255364 | 566..750 | 98 | | Plus |