Clone FMO12737 Report

Search the DGRC for FMO12737

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34267-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12737.5prime Sequence

257 bp (257 high quality bases) assembled on 2013-01-29

> FMO12737.5prime
CAGTCGACATGTTCCGCATTATCGCTGTGATCTTCGCCCTGGTAGCAATG
GCTTTTGCTGCTCCTGGTTACATTGAGCCCTCCTACGGAGTGGTTCCTGT
AGCCCAAGTGGTGCCCGTGGTGAAATCTGTTCCAGTGGTGCAGCACGTTC
CGGTGGTGAAGAATGTCCCAGTGGTTCAGCATGTCCCTGTGCTGAAGTCC
TACGCTGTTCCCACCTATGGACACCACATCTACCACGGTGCAAGCTTTCT
AGACCAT

FMO12737.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34267-RA 375 CG34267-RA 79..309 9..239 1140 99.6 Plus
CG34268-RA 373 CG34268-RA 61..309 9..239 875 90.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 500080..500298 239..21 1080 99.5 Minus
3L 28110227 3L 501100..501336 21..239 790 89.9 Plus
Blast to na_te.dros performed on 2014-11-28 18:40:42 has no hits.

FMO12737.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:05 Download gff for FMO12737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34267-RA 74..311 9..248 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:34 Download gff for FMO12737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34267-RA 79..316 9..248 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:44 Download gff for FMO12737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34267-RA 79..316 9..248 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:44 Download gff for FMO12737.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 500072..500298 21..248 97 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:34 Download gff for FMO12737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 500072..500298 21..248 97 <- Minus