FMO12738.5prime Sequence
827 bp (827 high quality bases) assembled on 2013-01-29
> FMO12738.5prime
CAGTCGACATGCAGCGGGCAAAACTCACTTCACAGGTCCTGCTGGCCACA
GCCATTCTCTACGCATGCCTGTCGCCCGCTGCCTGCGTTTACGAGGCGAA
AATCTTGGCGTTCCTTCAGGAGTTCCGTATGCGCATGTGCCACCCAATCC
CGAATCTAGGCCTGCCCGCATTGGACCCACTGCAGTTGGGGCCTGCTGAA
ACAGAACTGAACAACAAATACCTCGTGGACTTCACTGGGTCCATTGACAA
CTTTCAGTTGCACGGATTGTCCGATTTTGATGTGCCTGCGCTCAGCTTAT
CCCCGGTGCCCGGTTTGAAAAACACCATTAACGTTACCTTGCCACTCACG
TACTTCAAATCCTTATACACCGCCAAAGGATCCTTGGCCTATATCCTCAA
CTTGGCCGGTGATGGCAATGCCGAAACCTCCATTACAAACTTTTCAATCC
TCATTTCGTTTCGATTGAGATCGGTGTCTCCCCTGGCCATATCTTCATTA
CAGATTGAGCTGCGTTTGGGAGGACTATGGATTAACTTTGATAACTTGAT
GGAAGAGGATCGCATCAATGATTTCATCCATGCTTTGGTGAACGAAATGG
GAGTGGAGCTGCTTGGCGACGTCTGGGATTATGAACAGGGCACAGTGGTC
TCCAAAGTCCAAGCGGCCGTTAACAACTTTTTGGGTCAGTACTCTCTGTC
GGATATAATTCAAATAATAATTGGTGGCGACGGAGAAAGAGAGAGTGCGC
CCATATTTGATGGGGTGGAACCGGATTGCAAGCCGGATGCTACCACGACC
CCGCAAGACGCAAGCTTTCTAGACCAT
FMO12738.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34316-RA | 907 | CG34316-RA | 34..834 | 9..809 | 3975 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15231158..15231399 | 425..666 | 1210 | 100 | Plus |
| 3R | 32079331 | 3R | 15230618..15230838 | 9..229 | 1105 | 100 | Plus |
| 3R | 32079331 | 3R | 15230897..15231091 | 230..424 | 960 | 99.5 | Plus |
| 3R | 32079331 | 3R | 15231469..15231613 | 665..809 | 710 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-28 18:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhyd\Minos | 1773 | Dhyd\Minos DHMINOS 1773bp Derived from Z29098. | 1208..1265 | 467..410 | 110 | 65.5 | Minus |
FMO12738.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:06 Download gff for
FMO12738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34316-RA | 27..839 | 1..816 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:39 Download gff for
FMO12738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34316-RA | 27..839 | 1..816 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:48 Download gff for
FMO12738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34316-RA | 27..839 | 1..816 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:48 Download gff for
FMO12738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15230611..15230838 | 1..229 | 98 | -> | Plus |
| 3R | 15230897..15231091 | 230..424 | 99 | -> | Plus |
| 3R | 15231158..15231398 | 425..665 | 100 | -> | Plus |
| 3R | 15231470..15231618 | 666..816 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:39 Download gff for
FMO12738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11056333..11056560 | 1..229 | 98 | -> | Plus |
| arm_3R | 11056619..11056813 | 230..424 | 99 | -> | Plus |
| arm_3R | 11056880..11057120 | 425..665 | 100 | -> | Plus |
| arm_3R | 11057192..11057340 | 666..816 | 96 | | Plus |
