Clone FMO12739 Report

Search the DGRC for FMO12739

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:39
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34160-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12739.5prime Sequence

239 bp (239 high quality bases) assembled on 2013-01-29

> FMO12739.5prime
CAGTCGACATGTCCAACAACAAGGCATCCTCTTCCCGAGGCCGACATCCT
GGGATGCAGTTCAGCACTGCCATGGGAACGCCGGAAACCAAGCGCAAGAT
GCTTCTCTATAGACGATTATTGTGCCGTGAGTTGGCACGTGACGGGAAAA
CTCCCCGGGAGATCGCAAGGGCTAGAAATCTAACGCTTCAAGAGCAGGAT
CAGGGCAGGTTTCCGAAGTCCGCAAGCTTTCTAGACCAT

FMO12739.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG34160-RA 497 CG34160-RA 153..365 9..221 1065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10579997..10580192 26..221 980 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:40:55 has no hits.

FMO12739.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:07 Download gff for FMO12739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34160-RA 97..313 9..225 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:43 Download gff for FMO12739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34160-RA 153..369 9..225 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:51 Download gff for FMO12739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34160-RA 153..369 9..225 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:51 Download gff for FMO12739.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10579905..10579921 9..25 100 -> Plus
2L 10579997..10580196 26..225 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:43 Download gff for FMO12739.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10579905..10579921 9..25 100 -> Plus
arm_2L 10579997..10580196 26..225 99   Plus