Clone FMO12740 Report

Search the DGRC for FMO12740

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:40
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34165-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12740.5prime Sequence

323 bp (323 high quality bases) assembled on 2013-01-29

> FMO12740.5prime
CAGTCGACATGAAATTCACGATAATCGTTTTTGTTGCGCTCCTCGCCTTT
GCATCGGCCCAGTTCGGTCCGTTTGGTCAAATTATTAGGGGTATTGAACG
ATTTGAAGGTGGTCTGCAACAACAACAGCAGCAGCAGCAAAGCGGCTTTG
GCGGTGGTCAGCAGCAGCAACAGCAGGAGGAGGGTGTCATCTTCAGAGGT
CCTTTCGGCGGCGGAGTGGAGTTCTTCCAGGAGCAACAGCAGCAGCAGCA
AGGCGGTGGAGGTCAGCAGCAACAGCAGCAGGAGAACCTATTTAACTTCT
TCGGCGCAAGCTTTCTAGACCAT

FMO12740.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-RB 686 CG34165-RB 78..383 7..312 1500 99.3 Plus
CG34165-RA 515 CG34165-RA 78..383 7..312 1500 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14713931..14714223 20..312 1435 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 18:41:00 has no hits.

FMO12740.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:07 Download gff for FMO12740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 45..359 1..316 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:48 Download gff for FMO12740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 72..386 1..316 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:54 Download gff for FMO12740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 72..386 1..316 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:54 Download gff for FMO12740.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 14713932..14714226 21..316 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:48 Download gff for FMO12740.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14713932..14714226 21..316 98   Plus