Clone FMO12741 Report

Search the DGRC for FMO12741

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:41
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34130-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12741.5prime Sequence

855 bp (725 high quality bases) assembled on 2013-01-29

> FMO12741.5prime
CAGTCGACATGAAATATATTCGGGAAATCTTTTCAATCGCTCTTCTTCTG
ACAGAAGTCGGAGCTGCACACTCTAGTTGGTGGAATTCTTCAGCCTCGTA
CTTGCATGGCAGGCCACCAGTGAGAACATTGAACAAGAATGGAATTCGTC
GAACCTCGGGTGGTCATGCGGTCCCTTGGCTATTAAGGATAGTTGATGGA
CCTACTTTCGTCTGCGGAGCCTCGTACTTAAGTGCTTTGTATGCCCTCAC
CTCAGCAAACTGTATGCATAGTCATAGGTCACAGATGGAGTCGCTCAGTG
TGGAGTTGGTATCGTCGGACAGCCGGCAGGATAATCAGCTTGATTCGCAT
GATCCTCCAAACGCCCTTATCCGCAACATAATCGTTTCGAAGGATTGGCA
CTGGCCTGGAACTTTTATGGATGTCGCTGTCATAGAACTGACCAACCGCC
TGCGTGGCAATCGGAATAACTATGTTACCCTCTGTACCAATCCGCTGAGC
TCGTACAAAAGCCTTTCCGTTGTGTCCTACGGCGCATGACCCGCGGAAAA
CGTACGAACAGAAGAAATTGAGAGTGGTCAACCGAATGATCTGCGATTCG
GCGTACGGCAATTTTTCTTCTGCGCGAAACTGTCGCCTGTGCCAAGGAAT
TTAAAAGGAGCGCAGACTGTATGTTTAGCGCGGATGTCCTGTGACTGCTG
GAGATCAGCTTTGTGTATCGTCGCTGAAGTTCCCGCTGCAGGAGATCCCA
TTACCAGGGATCTCACCGATATCCATCAGTTTAACGATTCATCTGAGGCG
ATCAGTGAAAGCCTAAGGCACCTAGCCATCCAAAACCGGACCGGCATCGA
TTAAC

FMO12741.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34130-RA 974 CG34130-RA 18..860 9..844 3725 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26189118..26189960 844..9 3450 96.9 Minus
Blast to na_te.dros performed on 2014-11-28 18:41:06 has no hits.

FMO12741.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:08 Download gff for FMO12741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34130-RA 18..872 9..855 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:52 Download gff for FMO12741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34130-RA 18..872 9..855 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:57 Download gff for FMO12741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34130-RA 18..872 9..855 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:57 Download gff for FMO12741.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26189106..26189960 9..855 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:52 Download gff for FMO12741.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22014828..22015682 9..855 96   Minus