FMO12743.5prime Sequence
453 bp (453 high quality bases) assembled on 2013-01-29
> FMO12743.5prime
CAGTCGACATGTCCGCCCTAAAAAAATTTTATAAAATCAGCGCAGGTGTG
AGAAGAGGCGCACTACTTACCAGTTCCCGAAGAACACAAATTGATGCTTT
AAATAGTCCACAATTGCAGTTGCAAGTGCATCACTTTGCAACCAAAACAC
AAACAGCTGTTTTTAGCAGCAGCAACAACTACACGTGCATTTGCCGCAGT
ATACACTGCAGTAAGCCAGTGGACGATGCGGACAAGACGGTGGCCACGAA
TAGCATTCCTCTGGCGAAACTGGAGGCCAAGATGCAGCTGATCTACACCT
GCAAGGTGTGCCAGACCCGGAACATGAAGACCATTTCGAAGCTGGCATAC
CAACGCGGCGTTGTTATCGTGACCTGCGAGGGCTGCTCCAATCACCACCT
GATCGCCGACAATCTGAACTGGTTCACAGATCTGGACGGCAAGCGCAACA
TCG
FMO12743.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-RB | 618 | CG12379-RB | 74..518 | 9..453 | 2225 | 100 | Plus |
| CG8191-RA | 1486 | CG8191-RA | 1145..1377 | 453..221 | 1165 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15733322..15733554 | 453..221 | 1165 | 100 | Minus |
| X | 23542271 | X | 15733710..15733923 | 222..9 | 1070 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 18:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6866 | 108..220 | 127 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6879 | 108..213 | 109 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 139..341 | 104 | 55.8 | Plus |
FMO12743.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:09 Download gff for
FMO12743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 10..461 | 1..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:59 Download gff for
FMO12743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 67..518 | 1..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:05 Download gff for
FMO12743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 67..518 | 1..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:05 Download gff for
FMO12743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15733322..15733553 | 222..453 | 100 | <- | Minus |
| X | 15733711..15733928 | 1..221 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:59 Download gff for
FMO12743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15627355..15627586 | 222..453 | 100 | <- | Minus |
| arm_X | 15627744..15627961 | 1..221 | 98 | | Minus |
