Clone FMO12746 Report

Search the DGRC for FMO12746

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:46
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8152-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12746.5prime Sequence

1117 bp (1028 high quality bases) assembled on 2013-01-29

> FMO12746.5prime
CAGTCGACATGAATTCTCAAAACGAATTGCATCCAAATTGGCTGGCTCTA
ACAACATTGCCACTCCAACTGAAGCGATTCGTCCGAGCAGGAGATCCGGA
TTTTATCGCCGAGTCCCCGAAAGCAGTAAAGCACCAAATCGATGGCTTAA
ACGGAGCAGAAGCTCGTGAGTTCTACAAGGAGGTGTTGGATGCGCCCACA
ACCTGCCAACCTAACCTTCCAAGTACCCACAAAACTGCACAAACAAGAAG
AGAGCCAGAAAGGATCCTAGTCCCCTTCGACAAAAGCAAATTTTTCCGTT
TGGCCACTAGCAACAAAGTAGAGGAGCTGTCTCAAATGAAGGCCTCAGAA
GAGGATTTAAATTCTCGGGATTCCTTTGGCTGGACTGCCTTGATGATGGC
TGCCTGTGAAGGAGCCACGGAGGCAGTGAGTTGGCTCGTGCAGAGAGGGG
TCCAAGTAGAGACCTCAGACAAATCCGGAAACACAGCTCTGAAACTGGCC
CAACGAAAAGGTCACTTAGATGTAGTTCATCTTTTGGAATCCCTACCCAT
TTTAGAGGAAACTAGCGAAGAGGATGAGTCAGTTGATGGCAACAACCCCT
TTTACTGTGAAATCTGTAAGAGGGACTACAAAGAAACCCCCTGGCCAATT
CATCAAACATCCACAGTGCATCAGTTCAATCTAAAGGCTCTGCCCGCTCA
TAAGCTCCACAAATTTAACATATCTGCCAAAAATCGAGGACTCCAGCTGA
TGGTGAAACAGGGCTGGGACCAGGAGCACGGATTGGGGACCGAGTCAAAG
TGGGCGATTGTATCCCGTCAAGACTGTTCTTCGAAAGCAACGCACTGGAC
TGGGGAATTGAACAGCAGTCGGCAAGGGTCTCCACTTTGGTGCCTTCGAT
TTAAACGCTGTTAGAGAGGGATCCCATATATCAGCCGAGAGGACGCGAAG
CGATATGCAGAGGGAAAGGGGCGGCGATGGAAGCGGAGACGGTACCTCCG
CAGGGTACTAGGTGCAGCTTTCTAGACATCGGTTTGGGCGGCGGCGGGTC
CAGGTTAATGGTCATAATCTAATCTATATCTATCTTAATTCAACTAGGCC
TAGGGAGATCTGGTCTG

FMO12746.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8152-RA 1204 CG8152-RA 85..1089 9..1010 4755 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15310046..15311050 1010..9 4585 98.4 Minus
Blast to na_te.dros performed on 2014-11-28 18:30:44 has no hits.

FMO12746.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:48 Download gff for FMO12746.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 73..1087 3..1013 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:30 Download gff for FMO12746.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 78..1092 3..1013 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:42 Download gff for FMO12746.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 78..1092 3..1013 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:42 Download gff for FMO12746.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15310046..15311057 3..1010 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:30 Download gff for FMO12746.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11197551..11198562 3..1010 98   Minus