FMO12747.5prime Sequence
995 bp (363 high quality bases) assembled on 2013-01-29
> FMO12747.5prime
CAGTCGACATGGCTGATCATGCTTTTCATCGGCCCGGGCCGCTGAAACAA
GCGAACAAGGCTCACAAAACGGGTCGTCATCGCTCCAAAGGAGCAATAGA
CAATGCCCAAAAAGGGAAGATTGGACTGAGGCCTATCTCCCACAAGCACA
AGCAGCAGCAGCGCAAGGAGCAGCGTCGCAACCAGATGAACCATTTCAGG
AAAAACAAAAGGGAGGAGGTGTTGGAGCAAAAGAGAAAACTAGGTGGTCA
GAACACAGCTCCCTTTCTTGTGTGCCTACTACCCATGCACGAACAGATTG
ATCCCATGTCCGCATTGGAAATCCTAAAGAGCTGTGACAGCGAACTGGTC
GTGGAGAACTCCCCAAGTGGCATTGTTTACATCAATCTTCCAAGGTTCAA
GCAGCGTTTCGCTTTTGTCACACCACCAGTGGGACGCGGAAATGTGTTAA
TTGCCCTGGATTACCTTAAGGTTTGCGACACCACCCTGCTTTTGACCACC
GCAGCCTTTGGCGATGACGATATCTTCGACCGCTGGGGTCAACGGATCTT
TAACATGATGTTAGCCCAGGGAATACTCACTCTGGTAGTAGCCCTCATGG
ATCTGGAGTCAATCAATCCTAAGCGTCGTCCTGCTGCCAAGCAGGCGGCT
CAGAATGTCATATCTAATCTGTTGCCCGAGGAGAAGATCATGCAATTGGA
CACCGCTAGCGAGGCCTTGAATGTTATGCGGCGCATTGGAGGCCAGAAGA
GCGTATCCTCTATAACGTCGCTAATCGGCCACATCTCTTTGGAGATGTGG
TAGAGTTTAAACTGGGCTCAGATCCCAGCTACGATCTGGGCACACTAGAA
GTTACTGGTTTCTTACGTGGACAGTCTCTTAATGTGAATGGTTTGGTCCA
CATTCCCGGCTTGGTGATTTCCAGCTAAGTCTAGTGTGTCCTTCCAGATC
CGTATAAGCTAGATAATCGTGCGATGGAAAAAATAGTGAGGTGCG
FMO12747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7338-RA | 2844 | CG7338-RA | 109..1100 | 9..995 | 4460 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21335491..21336378 | 113..995 | 3835 | 96.5 | Plus |
| 3L | 28110227 | 3L | 21335323..21335429 | 9..115 | 535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:30:51 has no hits.
FMO12747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:49 Download gff for
FMO12747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7338-RA | 100..1097 | 3..995 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:36 Download gff for
FMO12747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7338-RA | 103..1100 | 3..995 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:45 Download gff for
FMO12747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7338-RA | 103..1100 | 3..995 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:45 Download gff for
FMO12747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21335317..21335428 | 3..114 | 97 | -> | Plus |
| 3L | 21335493..21336378 | 115..995 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:36 Download gff for
FMO12747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21328417..21328528 | 3..114 | 97 | -> | Plus |
| arm_3L | 21328593..21329478 | 115..995 | 96 | | Plus |
