FMO12748.5prime Sequence
904 bp (904 high quality bases) assembled on 2013-01-29
> FMO12748.5prime
CAGTCGACATGGATGGGGACCAAGTAAAGGGCATCCTGAAGTCGGGAAAC
AATAGTGCGCAATTTAGCCTGAAGGCAGCCAAATTTGATGAGGTCAACAT
ACTGGCCACGTTCCACCCGGCTGGTAAGGACTACGGCCACATGATCATCG
ACGAACCAAAGACACCCTTCGTCTTTGAGGAGGATTTGCCAAAGGAGTTG
GATACAAATGCCCTGATCGAAAAGTTGAGACACACATCAAAGTCAGAAAT
GCCGGCATTTGGCATCGAAGGAGACTCAGAAGAATCCTCGGCGGATGAGG
ACTTTCCCGAGTCTGTAGAGGAAAAAGTGCGTAGAATGGAGTTTGAGAGG
CGGCGAAAAGTGCATTACAAGGAGTTCTATTCGGTTCCACTGGCTCGACG
TCTTATAGCCGACGAGTTTGCCGAGTTGACCAGTTCAGAGTTTAATATTC
ACTGCGAAGGGGGAATGGAATCTTGTGAAGCGTGCAGTGAAAACAATCAA
CTCGACGGCGAAGCAAGCAACTTGACGCAAACAAAATACTCATATTCTGA
AAGTCAATCCGAATACAGGATATCAGATCATTCTGAGCCTGAACCAGGTT
TCTCCCCCAGCCATCACTGCTACCAAAAACTGAAGGCCGAGCTCTTTAGC
AAAGCAGAGCCGGAAGAATTGGCCTCTTTAACGCACTTGCATCGAATGCC
ATCGGTCAACGATGATGAACCAAGTCGCGAGCCTCGCGTCCCATACCCTT
CGGTTGTTCCGACTCAAACCCAAAATCTACATGAACACAAGAGTTCACTG
AAAATAACGTCCGAGAAGCCTACTCCTGCTCGTATATGTAAATCCAACCC
TGATAATCGTCCTGGCACTTCTAAGAAAGAGACCCGCGCAGCTTTCTAGA
CCAT
FMO12748.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6380-RB | 1128 | CG6380-RB | 95..973 | 9..887 | 4395 | 100 | Plus |
| CG6380-RA | 1069 | CG6380-RA | 95..973 | 9..887 | 4395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17291230..17292108 | 887..9 | 4395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:40:35 has no hits.
FMO12748.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:04 Download gff for
FMO12748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6380-RA | 90..973 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:30 Download gff for
FMO12748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6380-RA | 90..973 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:42 Download gff for
FMO12748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6380-RA | 90..973 | 1..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:42 Download gff for
FMO12748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17291230..17292113 | 1..887 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:30 Download gff for
FMO12748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17291230..17292113 | 1..887 | 99 | | Minus |
