FMO12749.5prime Sequence
1033 bp (1005 high quality bases) assembled on 2013-01-29
> FMO12749.5prime
CAGTCGACATGGAGATCATTCTACGACTGCTGGCCTTCATTCTGAATGCC
TTTGGCATGTTGGTGAATAAGATTCTAGATTTTGTATTGCCCCGTCAGAA
ACCCAAATTTTCGGGCATTCGTAATCCCCTGCTGAAGAAGTCCGTCGTTG
AATTGGTCACCCAATTGCGACGCGGCGAGATCACCTCGGTGGAGTTGGTT
AGCGCCTATATAGCACGTGTGCAGGAAGTGAATCCTTCTCTGAATGCCGT
TGTCGAGGATCGATTCGAGGCTGCCCTCCAAGATGCAAAATTGGCAGATC
AGTTCATCGAAAAGGCGAGCTCTGAGTTCGATCGTGTGGCCCTGTACACC
AAGTATCCCATACTGGGTGTACCGTTTACTGTCAAGGAGTCATGTGGTCT
TAAAGGATTATCCTTTGCCGTGGGCAGTCTTGCTCGCAAAAATATGAAAG
CCCCCCAGGACGGCGATGTGGTTGAACTGGTCCGTGCTGCTGGTGGCATA
CCCCTTTTGGTGTCTGCCAATCCAGAGTTTTGCATGAGTTTCGAAACCAG
CAATAATATCCAAGGACGTTGCTTGAATCCATATGATCTGCAACGAACTT
CCGCCGGATCTTCTGGCGGCGAGGCATCATTGAATGGCTGTGGAGCCACA
ACTTTTGGTGTGGGCTCCGATATCAGTGGTTCCATTCGCCTGCCGGCTCT
GTTCTGCGGCGTTTTTGGCCACAAGCCCACTGGCGGGCTTACGTCGGTCA
AGGGTCACTTCCCCTACTCGTTGACGGACAAGAAATTCTCCGAGATGCTG
CAGATCGGTCCCATCACAAGATTCGCCAGGGATTTGCTCTTGCTGTTGGA
AATAATGGCGGGCGATAAAAAACACAAACTGAAATGTCTGAACCAGTTGC
CCTGAAGGACATGAAAGTATACTATGCCTTTGGATACTCGGGCTTTACTG
CCTCACCCAATTCCCGTGGTGACTTCGAAATAAAACTGGCTCATCCTCAA
AGGCTGTCCCGCGTGCTTGGAAAGAAGAAGTGT
FMO12749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7910-RB | 1869 | CG7910-RB | 179..1205 | 4..1033 | 4825 | 98.3 | Plus |
| CG7910-RA | 1976 | CG7910-RA | 286..1312 | 4..1033 | 4825 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8088076..8088588 | 404..915 | 2500 | 99.6 | Plus |
| 3R | 32079331 | 3R | 8087784..8088012 | 178..406 | 1145 | 100 | Plus |
| 3R | 32079331 | 3R | 8087537..8087712 | 4..179 | 880 | 100 | Plus |
| 3R | 32079331 | 3R | 8088644..8088717 | 917..990 | 185 | 92.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:41:55 has no hits.
FMO12749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:13 Download gff for
FMO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7910-RA | 282..1312 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:26 Download gff for
FMO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7910-RA | 282..1312 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:26 Download gff for
FMO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7910-RA | 282..1312 | 1..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:26 Download gff for
FMO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8087533..8087712 | 1..179 | 98 | -> | Plus |
| 3R | 8087786..8088011 | 180..405 | 100 | -> | Plus |
| 3R | 8088078..8088589 | 406..916 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:26 Download gff for
FMO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3913255..3913434 | 1..179 | 98 | -> | Plus |
| arm_3R | 3913508..3913733 | 180..405 | 100 | -> | Plus |
| arm_3R | 3913800..3914311 | 406..916 | 99 | -> | Plus |
