FMO12750.5prime Sequence
997 bp (916 high quality bases) assembled on 2013-01-29
> FMO12750.5prime
CAGTCGACATGGGAATCCTGCAGGCGAGGAGGCATCACTGCGTCGACAAG
GTGGTGAGTGACCTGTGCCTGGGACACTACGAGCACGCTCTGAGGCAGAT
CAACGAGGATCTGGAAGGTTTACAGAACCACGATGAGATCATGGCGCTGC
TGGAGCTAAAGAATATCATTTTGAGACTGAGGTTGAAGGGCGAGGCCCAG
CGGACCATAGGCCCAACTCGCAAATCTGACGCCCTGCCCCACAAGTTCAC
ACTCGAGATGCTGGACGTGGTGCAGAAGGTCCTGCGGTGCCGCAATCACT
ACGAGGTGCTGCGCATCTCTCATCATGCCACCTACTCCGAGGTGAAGCGG
GCCTACCACAAGCTGGCCCTGCGCCTCCATCCGGACAAGAACAAATCTCC
TGGGGCTGAGCAGGCCTTCCGGCGGATCAGCGAGGCGGCTGACTGTCTCA
CGGACTGCCAGAAAAGGATTGAGTACAACATAGCAACGGCAGTGGGCGAC
TGCCACGACCAGGATCCCTCGCAGTACAAGGATTATCGCGGGGAAAGTGA
ATTCAATGAGGCAAATGGGAACGATCTGGGAGCCGCTTTCAGAAGGCCTT
ATCGGGGGGCCAATCAGCGGATGCCCCAGAGGCAGTCACTCTACCAAACA
CAGCAACTCGTCATCGGAGTGGTGGCTGCTCTGGTTTTTCTCTTCGTCAC
CATGCACTTCATCGCAGGCGCTCCTGCTTACAGTTTTACGCTAACCAGAA
ACCATAGCGCTCGTTCGGCTCAGTCGGACGAACCACATTGCCTACTACAT
GAATCCGACGACTCTGTCCTAGTACACCGAACAGCAGTTGGTCGAACTGG
AAGTAGAAATCGAGGAGGTTTACATCTCGGACTCTAACATAAGTGCAGGC
ATGAGCGTAGTTGGAGGGTTATTCTGTTCTCAGGCGAGCTAGGTAACCAC
TGACCAGAATTTGCTCCGCTGGTATGCCTGATGTCCCTCCCGCTTGC
FMO12750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30156-RB | 1489 | CG30156-RB | 343..1335 | 9..997 | 4430 | 96.8 | Plus |
| CG30156-RA | 1425 | CG30156-RA | 279..1271 | 9..997 | 4430 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6981969..6982708 | 748..9 | 3655 | 99.6 | Minus |
| 2R | 25286936 | 2R | 6981742..6981913 | 916..745 | 630 | 93.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:42:00 has no hits.
FMO12750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:14 Download gff for
FMO12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30156-RA | 272..1210 | 1..938 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:29 Download gff for
FMO12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30156-RA | 272..1210 | 1..938 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:29 Download gff for
FMO12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30156-RA | 272..1210 | 1..938 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:29 Download gff for
FMO12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6981742..6981909 | 749..916 | 93 | <- | Minus |
| 2R | 6981969..6982712 | 1..748 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:29 Download gff for
FMO12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2869247..2869414 | 749..916 | 93 | <- | Minus |
| arm_2R | 2869474..2870217 | 1..748 | 99 | | Minus |
