FMO12751.5prime Sequence
961 bp (870 high quality bases) assembled on 2013-01-29
> FMO12751.5prime
CAGTCGACATGTCCTCGTCCAACCGCAGCACCACGCCAACAGGCAGCGAA
ATGGACGAGGACGAAATGGTGGTCACGGAGTCGGAGGATAGCAACGACTC
CTGGACCACCGAGGAGTTTAGCTCGGAGTTTATCATGCGCTACGGCAGCA
GGCATTCCGGTGGTGGAAGCAATGGCACGCCCGGCAATGAGAAACCCTTC
GCCTGCCCTGTTCCGGGATGCAAAAAACGTTACAAGAACGTCAACGGCAT
CAAGTACCATTCGAAGAACGGTCACAAAAAGGACGGAAGAGTGCGCAAGG
GCTACAAGTGTCACTGCGGTAAGAGTTACAAAACGGCCCAGGGCCTGAAG
AACCACGCGCTGCACACACACAACTCGCAGCCGGATAGTGTGCTGAATGC
CCAGCTGGCCAATGCGTTGGCCATAGGCGATGGGGCCAGCGCGGCCACGC
CTGTGGGCAGCAGCAACACCTCCTCCAATCCGAACCCGCCGCCCATCATT
CAGCGCAGCAACTCGCCGTCTCAGTCGCTGGGCTCGTTGAGTCCGTCGAG
CATCAGCAACATGTCGAGCAGCGCCAGCAGTTGCCATGGAGGCAGCGGCA
GTCTGTCGAACGGGAATAATGGCAACAATGGGAGCACTACTAGCAACACT
GCCATTCTCACTAGCAACGGGAATGTCCTGCAGCAGCTCAGTGCCGGGAA
TGTGGTCACCCTGACCAATCTTCCCACGCAACAGCATCAGCAGCAACAGC
CGCAGCCGCAACAGCAGCAGCACAGCAACTCCATCAAAACACTGCAACAG
AAACCTCTTACTCCTGCTCAAACACAGCAACCTCAGCCAATCCCCATCGT
AACCACGGCAGCAGCGATTCCAGCCAAGCCGCCCCACGACTCTCCTGTCC
GTTACAGAGGTCCACAGCATCGCTTTCAACGAAACTGCCAACCACCGTCA
TTCCCTGCCCA
FMO12751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12054-RF | 2408 | CG12054-RF | 925..1879 | 9..961 | 4410 | 98 | Plus |
CG12054-RE | 4280 | CG12054-RE | 925..1879 | 9..961 | 4410 | 98 | Plus |
CG12054-RB | 2259 | CG12054-RB | 776..1730 | 9..961 | 4410 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31226565..31227078 | 288..800 | 2490 | 99.4 | Plus |
3R | 32079331 | 3R | 31226364..31226503 | 150..289 | 685 | 99.3 | Plus |
3R | 32079331 | 3R | 31226139..31226250 | 41..152 | 560 | 100 | Plus |
3R | 32079331 | 3R | 31228694..31228858 | 798..961 | 345 | 88.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:06 has no hits.
FMO12751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:15 Download gff for
FMO12751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12054-RC | 877..1834 | 1..960 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:34 Download gff for
FMO12751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12054-RB | 772..1729 | 1..960 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:32 Download gff for
FMO12751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12054-RB | 772..1729 | 1..960 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:32 Download gff for
FMO12751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31226141..31226249 | 43..151 | 100 | -> | Plus |
3R | 31226366..31226503 | 152..289 | 99 | -> | Plus |
3R | 31226567..31227078 | 290..800 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:34 Download gff for
FMO12751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27051863..27051971 | 43..151 | 100 | -> | Plus |
arm_3R | 27052088..27052225 | 152..289 | 99 | -> | Plus |
arm_3R | 27052289..27052800 | 290..800 | 99 | -> | Plus |