FMO12752.5prime Sequence
848 bp (848 high quality bases) assembled on 2013-01-29
> FMO12752.5prime
CAGTCGACATGCCATGCCTGTCAAATCCGGAAATCGAGATTATGCTCTAT
TGCCAGGCAATGTGCTTATTCCTGCTTAGCCTTGCTTGCGTTTCGCGGAG
CCACATAATCATGATAAGCGACTCGGATCCTGTTGTGGCTCGATTGTATG
AGCCAGCAAGCGAAAAGAAGCAGACTGCAAGTGGAGGATCATCGGAAGGG
TGTGAAACAAGTTCTGCTGTGCAAAATTCTTGTGGCCTTAGCCAAAAGAA
TGCCAAGAGCAAGGCTTCCAGCATTGCAATTAAGGCCGCCCAGGACGCCA
AGGCGGCCAATGACGCCCAGATGGCCGCCGGAGAGGCAGCCTCACTCCAA
GTGAAACAGGATCTGGCCGAGAAGGCGGTCCAAGCTGCTCGAGCCGCGGA
GGCAGCTCTTGCTGGCAAGCAACAGATCATGGAGCAACTGGAGCTGGAGG
AAAAGGAGGCGGTGGCCGTTGTGGACGAGGTTAAGAACTCACTCCACAGC
ACACAGGTGAACGCAGAATCTGCCATGTTAGCGTTTTCCGAAGCCAAGAT
TCAGCTGGACCAACTGAAAGTCCTTTTGGCTGAGGCCACCGCTCAAATGA
CCAACATTGAAACTTTCGCTAATGGTGCCCAATTGGAGATGGATGAGAAG
GGGCAGCTGTTGGAGGCGGCCAATCGGAGAGTGGAGAGCATCTCCAGACA
AGTGGTCGCTGCCAGGCAGGATTACGACAAGACCAAGAAGGCTGCCTATA
ATGCGGCTTGTGCGGCAGTGGAGGCCAAGCAAAAGGCTCAAAGGATGCAA
AGGGCGATTAGCTCTGCATCCTCTTCAAGCGCAAGCTTTCTAGACCAT
FMO12752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14841-RA | 956 | CG14841-RA | 3..824 | 9..830 | 4095 | 99.9 | Plus |
| CG14840-RA | 1006 | CG14840-RA | 753..822 | 725..794 | 200 | 85.7 | Plus |
| CG14840-RA | 1006 | CG14840-RA | 289..477 | 261..449 | 195 | 73.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14261523..14262228 | 830..125 | 3515 | 99.9 | Minus |
| 3R | 32079331 | 3R | 14262299..14262416 | 126..9 | 590 | 100 | Minus |
| 3R | 32079331 | 3R | 14260392..14260461 | 794..725 | 200 | 85.7 | Minus |
| 3R | 32079331 | 3R | 14260737..14260925 | 449..261 | 195 | 73.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:42:11 has no hits.
FMO12752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:16 Download gff for
FMO12752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14841-RA | 1..824 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:39 Download gff for
FMO12752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14841-RA | 1..824 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:35 Download gff for
FMO12752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14841-RA | 1..824 | 7..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:35 Download gff for
FMO12752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14261523..14262227 | 126..830 | 99 | <- | Minus |
| 3R | 14262300..14262422 | 1..125 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:39 Download gff for
FMO12752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10087245..10087949 | 126..830 | 99 | <- | Minus |
| arm_3R | 10088022..10088144 | 1..125 | 96 | | Minus |
