Clone FMO12754 Report

Search the DGRC for FMO12754

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:54
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32039-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12754.5prime Sequence

272 bp (272 high quality bases) assembled on 2013-01-29

> FMO12754.5prime
CAGTCCACATGGGAGCCTGTCTGTCCTGCTGCGGCCAAAGCGCCGAGGAA
ACCAACCTGATGCCATCGCCTGAGGAGCGCCGCCAGCAGCAGTTGGATGC
GGCGGAAAAGCGTCGCCAGGAGAATGAACATCGGGGCATTAAGAATCCGG
ACAGCGTACGCCGACAGCAACAAAGAGCGGAGGAAATGCAACGCAGGGAG
GAGGAGGCCGCCCGTCAGGGTCAAGGACAATCCAATCTTAGGTGGCAAAC
TAGCGCAAGCTTTCTAGACCAT

FMO12754.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32039-RB 881 CG32039-RB 126..372 8..254 1235 100 Plus
CG32039-RA 632 CG32039-RA 126..372 8..254 1235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9359246..9359416 72..242 855 100 Plus
3L 28110227 3L 9359124..9359188 8..72 325 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:42:23 has no hits.

FMO12754.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:17 Download gff for FMO12754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32039-RA 140..392 1..258 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:47 Download gff for FMO12754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32039-RA 123..375 1..258 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:41 Download gff for FMO12754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32039-RA 123..375 1..258 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:41 Download gff for FMO12754.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9359121..9359187 1..71 94 -> Plus
3L 9359246..9359416 72..242 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:47 Download gff for FMO12754.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9352221..9352287 1..71 94 -> Plus
arm_3L 9352346..9352516 72..242 100 -> Plus