FMO12757.5prime Sequence
584 bp (584 high quality bases) assembled on 2013-01-29
> FMO12757.5prime
CAGTCGACATGGCGGGCCCACTTTTGTGGCAAAACTTCAAGGTGTTCGTC
ACCCGCTACCCGATTATGCGCGGCATGATATCGTACAGCCTGATCTGGCC
CACGGGCAGCCTCATCCAGCAAACGGTTGAGGGCAGGCGCTGGGGCACCT
ACGACTGGTGGCGCGTGCTCCGGTTCAGCATGTACGGTGGTCTGTTTGTT
GCTCCTACCCTCTACGGATGGGTCAAGATTTCCAGCGCCATGTGGCCGCA
GACATCGTTGAGGACGGGCGTCATTAAGGCGGCGGTGGAGACGATCTCGT
ACACCCCCGGCGCGATGACCTGCTTCTACTTTATCATGAGCCTCCTGGAG
TCCAAGACGGTGGAGCAGGCGGTAGCCGAGGTCGGCAAGAAATTCCTGCC
CACGTACAAGGTGGCTCTGTCCGTATGGCCACTGGTGGCCACCATCAACT
TCACCCTGATCCCCGAGCGCAACCGGGTGCCATTCATCAGCGCGTGCAGC
CTGTGCTGGACCTGCTTCTTGGCCTACATGAAGCACCTGGAGCACCACGA
GGTGGACGGGGCCATTGCAAGCTTTCTAGACCAT
FMO12757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14778-RA | 753 | CG14778-RA | 139..696 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1470155..1470341 | 226..412 | 935 | 100 | Plus |
| X | 23542271 | X | 1470400..1470557 | 409..566 | 790 | 100 | Plus |
| X | 23542271 | X | 1469818..1469954 | 9..145 | 685 | 100 | Plus |
| X | 23542271 | X | 1470014..1470097 | 144..227 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:31 has no hits.
FMO12757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:18 Download gff for
FMO12757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 137..696 | 5..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:52 Download gff for
FMO12757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 137..696 | 5..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:47 Download gff for
FMO12757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 137..696 | 5..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:47 Download gff for
FMO12757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1469816..1469953 | 5..144 | 98 | -> | Plus |
| X | 1470015..1470097 | 145..227 | 100 | -> | Plus |
| X | 1470157..1470339 | 228..410 | 100 | -> | Plus |
| X | 1470402..1470551 | 411..560 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:52 Download gff for
FMO12757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1363849..1363986 | 5..144 | 98 | -> | Plus |
| arm_X | 1364048..1364130 | 145..227 | 100 | -> | Plus |
| arm_X | 1364190..1364372 | 228..410 | 100 | -> | Plus |
| arm_X | 1364435..1364584 | 411..560 | 100 | -> | Plus |
