FMO12759.5prime Sequence
593 bp (593 high quality bases) assembled on 2013-01-29
> FMO12759.5prime
CAGTCGACATGGCCGGGGAATATATCATACTGGAGAACTCGTCGACTTAT
CCGGGCTTCCATTCCAGTTCCAACGGATTGGCGAATGGCATGTACCGCTC
CGCCCAGCGCATCTCCACCGATCGCCTGGTCCTGCTCATTCTGCTGGTGA
GCACCACGGTGATCGGGCTGTTTGCCTACTGGGATGTAATGGTGCTCAAC
GCCGGCGCACTGCCACTGTCCAGAGGCACTAGCTCTGTTGATTACATGGA
GCCTGGACTGCGCAACGAAACCCTGGCCGAGAAGATGCATCGGGAGGTGA
GAGTCCTGTGCTGGGTGCTCACCACACCCAAATACCACAAGACCCGGGCC
ATTCACGTTTTGCGAACGTGGGGCAAACGCTGCAATAAGATCTACTTCAT
GACCTCTGAGCCGGATGACGAGCTGCCCACCGTTGTGCTGACCAAGCCGG
ACCGATACGAGATGCTGTGGGGCAAGACCAAAGAGGCCTTTGTCCACATC
CACGAGCAGATGCGCCACGAGGCGGATTGGTTCATAAAGGCGGACGACGA
CACGTATGTGAAAGATTCAGATTCTGCAAGCTTTCTAGACCAT
FMO12759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-RE | 1590 | CG7440-RE | 13..557 | 9..553 | 2725 | 100 | Plus |
| tgy-RC | 1319 | CG7440-RC | 13..557 | 9..553 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19126738..19127304 | 575..9 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:42 has no hits.
FMO12759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:12 Download gff for
FMO12759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 7..579 | 4..579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:17 Download gff for
FMO12759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 7..579 | 4..579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:18 Download gff for
FMO12759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RC | 10..560 | 4..556 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:18 Download gff for
FMO12759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19126734..19127307 | 4..579 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:17 Download gff for
FMO12759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19020767..19021340 | 4..579 | 99 | | Minus |
