FMO12761.5prime Sequence
913 bp (908 high quality bases) assembled on 2013-01-29
> FMO12761.5prime
CAGTCGACATGGAGTTGAGAATTTGTTCCAGCTATTCGCTCTACAAGTTT
CTCGCCCTGTGCTGCTTTTTGACCATCGTGCTTTTTCTAATATATTCATC
GAATACTTCTTCGAATACAAATCATGATTTATATCCGCCTACTACGCGAT
TTTCTCGAGTTTCGGTAAAGGCTGAACCGCAGAAATTCTTTGTGAAAACA
TCCAAGTGCCATATACCCTATGTGGATCCTTTCAACGACGAAGCCATGGA
GTTGTACAAACCGCAAACACTAATCACCTGCTCGAATGAGACCGATCTCA
TATCAACAACATACAATGAAATTATCAAACGGCATATTCTGCACATCGAC
GATGAAGTCGCTCAAAAATTGCTTAATTTCACAGACAAGGACTATAATTG
CTTTTACCGCGAAATCAAATATGGAAAGATTGCAGATACCTACGACAATC
TCAAGGCCAAAAAATATTTCACGAGTGGTTACGAGGTGCCAGTTCATGTG
GAGGGAATGATCGTCGAGTGCCAGACGGCTGATGATCCGATAGTTGTCCT
TCAGAAGGACGCCTTCGCCTTCATCCAGCATCGGCCGTTGCCCAAGGACT
CCATAAGACTCAGGGCAGCTCGGAAGCCAAGCGTGATAATGTACGGTATC
GACTCTCTTTCCCGAATAAACTTAAAGACGCACTATGCCCAAGGTTTTTA
ACTTTCTACAGGGCCCAGGATGGTACGAGATGCAAGGATACAATAAGGTT
GCCGACAACTCATTCCCCAACATACTCGCTATTCTCAGTGGATATTCAGC
TAGTACGGCTAAGGAAAATGTCTGCGATACGGATAAACAGCGCTGCCTGG
ACGAGATGCCATGATATGGAGTATTCCAAGAATGCCAGCTATTGACCGGA
TACGCGGAAGGAG
FMO12761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18088-RC | 2628 | CG18088-RC | 35..937 | 8..908 | 4360 | 99.1 | Plus |
| CG18088-RB | 2044 | CG18088-RB | 35..937 | 8..908 | 4360 | 99.1 | Plus |
| CG18088-RA | 2260 | CG18088-RA | 35..937 | 8..908 | 4360 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8967569..8968009 | 8..448 | 2205 | 100 | Plus |
| 2L | 23513712 | 2L | 8968079..8968378 | 449..749 | 1440 | 99.3 | Plus |
| 2L | 23513712 | 2L | 8968771..8968936 | 746..908 | 635 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:50 has no hits.
FMO12761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:20 Download gff for
FMO12761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18088-RA | 30..938 | 1..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:05 Download gff for
FMO12761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18088-RA | 32..940 | 1..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:57 Download gff for
FMO12761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18088-RA | 32..940 | 1..913 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:57 Download gff for
FMO12761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8967566..8968009 | 1..448 | 99 | -> | Plus |
| 2L | 8968079..8968376 | 449..747 | 99 | -> | Plus |
| 2L | 8968773..8968939 | 748..913 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:05 Download gff for
FMO12761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8967566..8968009 | 1..448 | 99 | -> | Plus |
| arm_2L | 8968079..8968376 | 449..747 | 99 | -> | Plus |
| arm_2L | 8968773..8968939 | 748..913 | 95 | | Plus |
