Clone FMO12762 Report

Search the DGRC for FMO12762

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11030-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12762.5prime Sequence

1036 bp (974 high quality bases) assembled on 2013-01-29

> FMO12762.5prime
CAGTCGACATGGTGCAGGCACTGGACTACGATTGCGAGGCACAGGGCCAG
GACATCCCGCAGGCGATTCAGTTGCTCGGGGAGATGAACAGCAATGTGAA
ACAGGTGACTGACTTGGTGGAGGGCATGCTGCAGCGAGTCAAGCGAGGCG
AGCTAACCACAGAGTACGGCCTGAGCTTTCTGGAAGTGAAGTACCACATG
CTACTGGACTACTTGATCAATCTGACATATGTGGTGCTGCGCAAATGCTC
CGGCGAGACCATTGAGGGTGATCCCTCCATCGAACGTCTGATCGAGATTC
GCACTGTGCTGGAGAAGATTCGGCCCATAGACCACAAGCTACGCTATCAG
ATTGACAAACTGGTAAAGACAGCCACCACTGGCGTCTCAAGCAGTACGGA
TCCCATACTTTACAAACCCAACCCAGATGATATGATGAGCAGCGCAGGCG
GAGCAGGCCGAGATGAGGATGATGGAGAAGATGACAGCGATGAGGAGGAC
GAGGACGACGATGAGGAGGATGAGGACGAGGCCGGCGCAGCGAAAATGCC
CCGGAAAGCGGCCACAGCCGGAAAGTCCGGAGTGTACGTGCCACCGCGCA
TCAAGCCCGTTTATTACGATGGCGATGAACGCGATGCCGACAAGGAGAAA
AAGGCACTGGATCGGGCCAAGAAGCGGGCCATTACGTCTTCCATGCTGCA
GGACCTCAAAGAGGAGTACTTGGATGCTCCTACAGAGATTTCATCTGGTT
CGCGTGCTCAGCAGATGCTTTCTCAAGCTCAGAAAGGAGAAGCAGGAGTA
CGAGGAGACCTACTTTGATGCGTCTGCCGGTGACCAAGGCGGAGAAGCAT
CGCCCAGCGAAAACTGACCACCTTGGGCACACTTGGCGATGAATTCTTGG
GGAGATCATCGGGATTCAGCCCTGCGTGTAGATGGAAGCAAAAGCGCAAC
TTGCCCAAAACGGGAAGGGAAAGAAACGTGCGGTAAAAGCGAAATTCCAT
TGCTAGCTTTCCTAGACCATTCGTTTGGCCGCGCGG

FMO12762.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11030-RB 4173 CG11030-RB 565..1561 9..1001 4675 98.5 Plus
CG11030-RA 1800 CG11030-RA 565..1561 9..1001 4675 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5758693..5759364 16..687 3360 100 Plus
2L 23513712 2L 5759429..5759617 686..877 810 98.4 Plus
2L 23513712 2L 5759676..5759784 876..980 270 91.7 Plus
Blast to na_te.dros performed 2014-11-28 18:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 3788..3921 140..13 132 59.7 Minus
TAHRE 10463 TAHRE OSV 10463bp 7155..7210 140..85 118 67.9 Minus

FMO12762.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:21 Download gff for FMO12762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 556..1559 1..1001 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:08 Download gff for FMO12762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 558..1561 1..1001 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:59 Download gff for FMO12762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 558..1561 1..1001 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:59 Download gff for FMO12762.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5758690..5759362 13..685 99 -> Plus
2L 5759429..5759616 686..876 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:08 Download gff for FMO12762.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5758690..5759362 13..685 99 -> Plus
arm_2L 5759429..5759616 686..876 98 -> Plus