FMO12762.5prime Sequence
1036 bp (974 high quality bases) assembled on 2013-01-29
> FMO12762.5prime
CAGTCGACATGGTGCAGGCACTGGACTACGATTGCGAGGCACAGGGCCAG
GACATCCCGCAGGCGATTCAGTTGCTCGGGGAGATGAACAGCAATGTGAA
ACAGGTGACTGACTTGGTGGAGGGCATGCTGCAGCGAGTCAAGCGAGGCG
AGCTAACCACAGAGTACGGCCTGAGCTTTCTGGAAGTGAAGTACCACATG
CTACTGGACTACTTGATCAATCTGACATATGTGGTGCTGCGCAAATGCTC
CGGCGAGACCATTGAGGGTGATCCCTCCATCGAACGTCTGATCGAGATTC
GCACTGTGCTGGAGAAGATTCGGCCCATAGACCACAAGCTACGCTATCAG
ATTGACAAACTGGTAAAGACAGCCACCACTGGCGTCTCAAGCAGTACGGA
TCCCATACTTTACAAACCCAACCCAGATGATATGATGAGCAGCGCAGGCG
GAGCAGGCCGAGATGAGGATGATGGAGAAGATGACAGCGATGAGGAGGAC
GAGGACGACGATGAGGAGGATGAGGACGAGGCCGGCGCAGCGAAAATGCC
CCGGAAAGCGGCCACAGCCGGAAAGTCCGGAGTGTACGTGCCACCGCGCA
TCAAGCCCGTTTATTACGATGGCGATGAACGCGATGCCGACAAGGAGAAA
AAGGCACTGGATCGGGCCAAGAAGCGGGCCATTACGTCTTCCATGCTGCA
GGACCTCAAAGAGGAGTACTTGGATGCTCCTACAGAGATTTCATCTGGTT
CGCGTGCTCAGCAGATGCTTTCTCAAGCTCAGAAAGGAGAAGCAGGAGTA
CGAGGAGACCTACTTTGATGCGTCTGCCGGTGACCAAGGCGGAGAAGCAT
CGCCCAGCGAAAACTGACCACCTTGGGCACACTTGGCGATGAATTCTTGG
GGAGATCATCGGGATTCAGCCCTGCGTGTAGATGGAAGCAAAAGCGCAAC
TTGCCCAAAACGGGAAGGGAAAGAAACGTGCGGTAAAAGCGAAATTCCAT
TGCTAGCTTTCCTAGACCATTCGTTTGGCCGCGCGG
FMO12762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11030-RB | 4173 | CG11030-RB | 565..1561 | 9..1001 | 4675 | 98.5 | Plus |
CG11030-RA | 1800 | CG11030-RA | 565..1561 | 9..1001 | 4675 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5758693..5759364 | 16..687 | 3360 | 100 | Plus |
2L | 23513712 | 2L | 5759429..5759617 | 686..877 | 810 | 98.4 | Plus |
2L | 23513712 | 2L | 5759676..5759784 | 876..980 | 270 | 91.7 | Plus |
Blast to na_te.dros performed 2014-11-28 18:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 3788..3921 | 140..13 | 132 | 59.7 | Minus |
TAHRE | 10463 | TAHRE OSV 10463bp | 7155..7210 | 140..85 | 118 | 67.9 | Minus |
FMO12762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:21 Download gff for
FMO12762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11030-RA | 556..1559 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:08 Download gff for
FMO12762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11030-RA | 558..1561 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:59 Download gff for
FMO12762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11030-RA | 558..1561 | 1..1001 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:59 Download gff for
FMO12762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5758690..5759362 | 13..685 | 99 | -> | Plus |
2L | 5759429..5759616 | 686..876 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:08 Download gff for
FMO12762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5758690..5759362 | 13..685 | 99 | -> | Plus |
arm_2L | 5759429..5759616 | 686..876 | 98 | -> | Plus |