Clone FMO12763 Report

Search the DGRC for FMO12763

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15059-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12763.5prime Sequence

467 bp (467 high quality bases) assembled on 2013-01-29

> FMO12763.5prime
CAGTCGACATGCCAAATTCGTCAGTAATCAGCAGGGTGAACGCGGGATTG
GCTCGCTGTTTGAGCCACCATCGGCGATTGTGTCGCGGCATTGCCGAGCT
GGACCGGCTCATCCACAACGATGAGTTCTTGAAGGATCCCAGGACGCAGT
GGCTGCTCCATCAGCGGCGTCAAACCGAGGAGGAGCAGGCAAATGCAGAT
GCTAGGATCAGTCCGTTGGGCAGAATGGGTTGTGAAATGGGTCGTCTGCT
GGGTAGGTCCAAGATAAATCTGTCCCCGCAATCCCGAAAGAACAATCTCG
TCGTGACCCGGACCTTTTGCCAAATCCTCCAAGTTGAAAACTCCACACCC
AGAAAGCAGTCGGGACCAATGCCTGCTCCAACTCCACTGCCATCGCCAGA
AAGAAGGCAGAGTCTCATCTTCAGCGCTAGCCTGTCTCGTCCTGAGCCGG
CAAGCTTTCTAGACCAT

FMO12763.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15059-RC 904 CG15059-RC 70..510 9..449 2205 100 Plus
CG15059-RB 841 CG15059-RB 70..510 9..449 2205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18259167..18259448 290..9 1410 100 Minus
X 23542271 X 18258945..18259105 449..289 805 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:43:02 has no hits.

FMO12763.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:21 Download gff for FMO12763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15059-RB 2..453 1..454 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:14 Download gff for FMO12763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15059-RB 2..453 1..454 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:05 Download gff for FMO12763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15059-RB 63..514 1..454 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:05 Download gff for FMO12763.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18258941..18259103 291..454 98 <- Minus
X 18259167..18259455 1..290 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:14 Download gff for FMO12763.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18152974..18153136 291..454 98 <- Minus
arm_X 18153200..18153488 1..290 98   Minus