FMO12769.5prime Sequence
347 bp (347 high quality bases) assembled on 2013-01-29
> FMO12769.5prime
CAGTCGACATGGTTCTCAAAGTGCCGACGTCCAAAGTCCTGCTAGTCCTG
GCCACCTTGTTCGCCGTGGCGGCGATGATCAGCAGCTGGATGCCCCAGGT
GGCGGCCAGTCCGCTCGCACCCACGGAATACGAACAGAGACGCATGATGT
GCTCCACCGGCCTCAGCGATGTGATACAGAAGATATGCGTAAGCGGAACG
GTGGCCCTTGGCGATGTATTTCCCAACAGTTTCGGGAAGCGCAGGAAGCG
CGACTTGCAGAACGTAACCGATTTGTGCTGCAAGTCGGGTGGCTGCACCT
ACAGGGAGCTCTTGCAGTACTGCAAAGGAGCAAGCTTTCTAGACCAT
FMO12769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp6-RA | 1908 | CG14049-RA | 1338..1660 | 7..329 | 1615 | 100 | Plus |
| Ilp6-RD | 702 | CG14049-RD | 134..454 | 9..329 | 1605 | 100 | Plus |
| Ilp6-RC | 941 | CG14049-RC | 373..693 | 9..329 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2331926..2332139 | 222..9 | 1070 | 100 | Minus |
| X | 23542271 | X | 2331741..2331847 | 329..223 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:31 has no hits.
FMO12769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:25 Download gff for
FMO12769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp6-RA | 1331..1660 | 1..329 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:31 Download gff for
FMO12769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp6-RA | 1331..1660 | 1..329 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:25 Download gff for
FMO12769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp6-RA | 1331..1660 | 1..329 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:25 Download gff for
FMO12769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2331741..2331847 | 223..329 | 100 | <- | Minus |
| X | 2331926..2332147 | 1..222 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:31 Download gff for
FMO12769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2225774..2225880 | 223..329 | 100 | <- | Minus |
| arm_X | 2225959..2226180 | 1..222 | 98 | | Minus |
