FMO12772.5prime Sequence
821 bp (821 high quality bases) assembled on 2013-01-29
> FMO12772.5prime
CAGTCGACATGGCCGATTTACTCAATGGAACCCTAATCATTTCGGAGGAT
CCTGTCCGCCTGCCACTCATCGGAAGTCCATGGCCATCGCTGACCATCGT
TTCGCTCTATCTGCTGTTTGTCTTGAAGTTAGGCAGGAAGTTCATGGAGA
ACAGAAAGCCCTACGATCTCCGCAGAGTCATCAGGGCATACAACATTATG
CAGATTGTCTACAACGGCGTTATTCTGATAGCGGGTCTTCACTTTTTGTT
CGTCCTGAAGGCCTACGACCTGCGATGCATCACCAAACTGCCGCTGGATC
ACGAGCTGAAGAGCCGAGAAAGATGGTTGACCTACTCGTACTTCTTCAAC
AAGTTCATGGATCTGCTGGAGACTGTGTTCTTTGTGCTGCGCAAGAAGGA
TCGCCAGATATCCTTCCTGCACGTCTTCCACCACCTGGTGATGTCCTTTG
GCGGATACCTGCACATTACCTTCAACGGCTATGGAGGCACTCTGTTCCCA
TTATGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTA
CCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTCGGTGGAAGAAGTACA
TCACCATTGTCCAGCTGGTCCAGTTCATCCTGGTGCTGGCGAACTTTAGC
TACACCCTGATGCAGCCCGATTGCAATGCCTCCCGAACTGTGATATATAC
TGGCATGTTCATTTCCACGACCTTCATCCTGATGTTTGCCAACTTCTACA
TTCACAACTACATACTGAATGGAAGCAAACAGAAGAGCGCGTTGAAATCC
GATGCAAGCTTTCTAGACCAT
FMO12772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8534-RA | 990 | CG8534-RA | 59..853 | 9..803 | 3975 | 100 | Plus |
CG9458-RA | 900 | CG9458-RA | 281..439 | 276..434 | 390 | 83 | Plus |
eloF-RA | 933 | CG16905-RA | 367..618 | 378..626 | 385 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9813232..9813802 | 233..803 | 2855 | 100 | Plus |
3R | 32079331 | 3R | 9812805..9813030 | 9..234 | 1130 | 100 | Plus |
3R | 32079331 | 3R | 9819375..9819533 | 434..276 | 390 | 83 | Minus |
3R | 32079331 | 3R | 9817871..9818029 | 434..276 | 360 | 81.8 | Minus |
3R | 32079331 | 3R | 9814592..9814843 | 378..626 | 355 | 77 | Plus |
3R | 32079331 | 3R | 22533152..22533236 | 434..350 | 215 | 83.5 | Minus |
3R | 32079331 | 3R | 22555518..22555601 | 351..434 | 195 | 82.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:44 has no hits.
FMO12772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:19 Download gff for
FMO12772.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8534-RA | 57..859 | 6..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:01 Download gff for
FMO12772.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8534-RA | 57..859 | 6..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:54 Download gff for
FMO12772.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8534-RA | 57..859 | 6..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:54 Download gff for
FMO12772.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9812803..9813029 | 6..233 | 99 | -> | Plus |
3R | 9813233..9813808 | 234..809 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:01 Download gff for
FMO12772.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5638525..5638751 | 6..233 | 99 | -> | Plus |
arm_3R | 5638955..5639530 | 234..809 | 99 | | Plus |