FMO12773.5prime Sequence
1004 bp (938 high quality bases) assembled on 2013-01-29
> FMO12773.5prime
CAGTCGACATGAAATCCCAGTACACCCGAAAAGCCAAACCAGAGCCAGCA
AAAACACCTACAGCACTAGAGCCCAAGACTAATACTAAACTGGCGGGTCC
AAAATCGAGATCCACGACGGTGGTGGTGAAGCGCCGGAATCGCCGAAATT
CCATTGATGGAGCAGCAGGAGGCTCCACTAGCGGCAATTCCGAGGGGGGT
AATTCCAGAGCAGCTTTCTCCGGAAGTGGTTATTCGGCAGGAAATAATTC
CGAAGGAGGTACATCGACTGGACGCAAGTCCATTGGTAGTAAATCCAGAG
GAACTTATTTCCGAGCAAGTTATACCGGTGCTGGTAGTTCCGGATCTGAG
AATAGGTCGCCGCCCCAGCTTGTTCCGGTGCGGCGTAAGCCCCTCAGTGA
TTACATGATGCTGGAGGAACAGCCATCTACCTCCAGTCGTCCAACCACAT
CCTCTTCCTATTTATCGGACCAGGATCGTCCGATGAGTTATGCCGCTGCG
GTGGAATCACTCCCCATATCTAGGCTCAAGGTCAAGGTGGTGCTATCCCC
ACGTCTCAAGCGGTCCGGCAATCAGCCGCCGATCAAGCGGCCGAACCGTA
AAAATTCACCCAACGCCAAGGTCAAATCGATCCCACCGACGCAGTCTAAG
ACACACAATATCCAGCTAAATCCGAAGCGCAATATGGCCCAGGTCCCGCC
CCCATCCCGCGATGCCACCGTGAGTAACAAGTCGAATAACTTAGCGCCAC
CTGGCGGAAACAAAAGAAACCCAGTCCGAAGAAATCCCAAAAAGCTAAAG
CAAAATCAACCACGATCAGAAGCTACTTCTCCGGAGCAGCCACCTCACCA
AAGTCTTTATCACCTTGGGGATAATCAAGTTCCTCCGCCGAAAGTCTCCG
ATTCCACCGCCTATCTGGGACCATCCACATGAAAAATGCCTCGCCTTTCT
GGCTGGAGCAAACGGGTGGTTAAAGGCCGAATCCTAACGGGGACAATTGA
AGAC
FMO12773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9692-RB | 1393 | CG9692-RB | 45..1039 | 9..1004 | 4430 | 97 | Plus |
| CG9692-RC | 1389 | CG9692-RC | 45..1035 | 9..1004 | 4360 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16705110..16706057 | 39..988 | 4070 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:43:48 has no hits.
FMO12773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:27 Download gff for
FMO12773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9692-RB | 1..931 | 9..939 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:42 Download gff for
FMO12773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9692-RB | 37..975 | 2..939 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:38 Download gff for
FMO12773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9692-RB | 37..975 | 2..939 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:38 Download gff for
FMO12773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16705110..16706010 | 39..939 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:42 Download gff for
FMO12773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16698210..16699110 | 39..939 | 98 | | Plus |
