FMO12775.5prime Sequence
710 bp (710 high quality bases) assembled on 2013-01-29
> FMO12775.5prime
CAGTCGACATGTTGTGTCCGCCAATGGCCCTGGGCCCATTTCTCGCCGCC
CCCGTGCCACGCCCACCGCCCAGCGCATCGGAGAAGAAGAGAATCTGTCG
GAACCTATTCAATAACGCTCCCGGGGACTCGAATATCGATCAGCTGTTGG
CCCAGGAGCAGCACACGCAGAGATTATACGTTAAGGAACGCTACGGATAT
GACATCCAGCTGGAATCTAATCGGGATGCGGATGCGAATACGGATGCGGA
TGCTGATACGGATGCCCATTGTCAGGTCCTGCGCGGAATGCGGTATCCGA
CCTCAAGGACGATATCCAGCACCGATGCCGATGAGTGCAATCCAAAGGCA
GTCAGCCAAGCGCCGAGGGGCATGGCCCTGACTCCCGCCCAGATCTCCGC
CAGCGCAAAGCTGATCCTTCAGAAATGCCCGGAAAGCGATCGCAAAAAAA
GCAACGGCAGTGCGGATTTGGCCAACTGCACGCGACATGGCCAAAAGCCA
TATGCGAGGCAGCCACAAGGCCTCAAAGGCATGTACAATGTTCGCAAGAC
CGTGAATGGTATTTCGAAACCCAACGTCAAGAATGGTTACAACAACAACA
ACAACAGCAGCAGCAGCAACAACAACAGCAACATGAATATTAATAATAAG
ATTGTGGATAATGGTACTAGCGAATTGGCAGATCAGAAGCAGGCAAGCTT
TCTAGACCAT
FMO12775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glec-RA | 2050 | CG6575-RA | 347..1031 | 8..692 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21855399..21855920 | 529..8 | 2610 | 100 | Minus |
| 3R | 32079331 | 3R | 21851713..21851878 | 692..527 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:31:00 has no hits.
FMO12775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:05 Download gff for
FMO12775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 337..1034 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:19 Download gff for
FMO12775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 341..1038 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:29 Download gff for
FMO12775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 341..1038 | 1..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:29 Download gff for
FMO12775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21851706..21851876 | 529..701 | 98 | <- | Minus |
| 3R | 21855400..21855926 | 1..528 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:19 Download gff for
FMO12775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17677428..17677598 | 529..701 | 98 | <- | Minus |
| arm_3R | 17681122..17681648 | 1..528 | 99 | | Minus |
