FMO12777.5prime Sequence
407 bp (407 high quality bases) assembled on 2013-01-29
> FMO12777.5prime
CAGTCGACATGAACAAATTCTTCGTCCTTGCCGTCGCCGCCCTGGCTGTT
TCCTGTGTCCAGGCCGACTCCTTCGACGCCCGAGCCGAGACTCGCGAGTA
TAAGAGCGACCTGAAGGAGGATGGCAGCTATGCCTATCAGTACCAGACGT
CCAATGGCATCGCTGGCCAGGAATCGGGCGTGGGTGGTTACTATGCCAGC
GGCTCGAACGCCTACTACGCCCCCGATGGCCAGCTCATCCAGTTGACCTA
CACCGCCGACAGCAATGGCTACCACCCGGCCGGCGCCCATCTGCCCACAC
CTCCTCCAATCCCGGCTTCCATCCTGAAGTCACTGGAGTACATCCGCACC
CATCCCCAGCAGGAGAGTCGCCAGGGTCAAGGACGATTCGCAAGCTTTCT
AGACCAT
FMO12777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ec-RA | 566 | CG8634-RA | 81..461 | 9..389 | 1905 | 100 | Plus |
| Cpr65Eb-RA | 1004 | CG8638-RA | 200..437 | 115..352 | 290 | 75.8 | Plus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 345..412 | 291..358 | 205 | 86.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7093368..7093736 | 21..389 | 1845 | 100 | Plus |
| 3L | 28110227 | 3L | 7088280..7088517 | 352..115 | 275 | 74.4 | Minus |
| 3L | 28110227 | 3L | 10890491..10890558 | 291..358 | 205 | 86.8 | Plus |
| 3L | 28110227 | 3L | 10892291..10892359 | 291..359 | 180 | 84.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:31:12 has no hits.
FMO12777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:07 Download gff for
FMO12777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 76..456 | 9..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:27 Download gff for
FMO12777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 81..461 | 9..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:37 Download gff for
FMO12777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 81..461 | 9..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:37 Download gff for
FMO12777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7093368..7093736 | 21..389 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:27 Download gff for
FMO12777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7086468..7086836 | 21..389 | 100 | | Plus |
